RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 TRBV23OR9-2A0A075B6M9 112 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 LDB3O75112 727 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 LAMP2P13473 410 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 CPMP14384 443 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 CD53P19397 219 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 RAB3BP20337 219 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 GJA4P35212 333 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 FBXO42Q6P3S6 717 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 TMPRSS11FQ6ZWK6 438 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 ZAR1Q86SH2 424 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 TOMM5Q8N4H5 51 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 ANGPTL6Q8NI99 470 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 TTC9Q92623 222 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 OR51J1Q9H342 316 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 ST6GALNAC2Q9UJ37 374 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 SLC35A3Q9Y2D2 325 aa12.23□□□□□ -0.45
ACTN1-202ENST00000376839 A0A1W2PQU0 124 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 LRRC72A6NJI9 287 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 CTSVO60911 334 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 STX11O75558 287 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 DBIP07108 87 aaKnown RBP12.22□□□□□ -0.45
ACTN1-202ENST00000376839 AK4P27144 223 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-202ENST00000376839 BMP8BP34820 402 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 PER3P56645 1201 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 SGCGQ13326 291 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 TP53I3Q53FA7 332 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 FHL5Q5TD97 284 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 BMP8AQ7Z5Y6 402 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 BEST4Q8NFU0 473 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 MED30Q96HR3 178 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 KIR3DX1Q9H7L2 352 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 ING4Q9UNL4 249 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 RIIAD1A6NNX1 92 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 ANKRD34CP0C6C1 535 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 RPS15AP62244 130 aaKnown RBP12.22□□□□□ -0.45
ACTN1-202ENST00000376839 EXOSC7Q15024 291 aaKnown RBP12.22□□□□□ -0.45
ACTN1-202ENST00000376839 TRAM1Q15629 374 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 AMZ1Q400G9 498 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 SIGIRRQ6IA17 410 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 PRSS45Q7RTY3 260 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 PRSS41Q7RTY9 318 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 IZUMO1Q8IYV9 350 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 ZNF687Q8N1G0 1237 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 COX18Q8N8Q8 333 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 TMEM52Q8NDY8 209 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 OR51Q1Q8NH59 317 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 SLC6A17Q9H1V8 727 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 EMC7Q9NPA0 242 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 STMN3Q9NZ72 180 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 DAPP1Q9UN19 280 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 C19orf53Q9UNZ5 99 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-202ENST00000376839 TMEM5Q9Y2B1 443 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 MRPS2Q9Y399 296 aaKnown RBP12.22□□□□□ -0.45
ACTN1-202ENST00000376839 MED31Q9Y3C7 131 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 NUBP2Q9Y5Y2 271 aa12.22□□□□□ -0.45
ACTN1-202ENST00000376839 GXYLT2A0PJZ3 443 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 PTP4A3O75365 173 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 MT-ND4P03905 459 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 SLC35G6P0C7Q6 338 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 ANXA3P12429 323 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 NRG3P56975 720 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 TAS2R43P59537 309 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 SRP54P61011 504 aaKnown RBP12.21□□□□□ -0.45
ACTN1-202ENST00000376839 TANGO2Q6ICL3 276 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 ZNF782Q6ZMW2 699 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-202ENST00000376839 OR51L1Q8NGJ5 315 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 OR4C6Q8NH72 309 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 NT5CQ8TCD5 201 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 SP7Q8TDD2 431 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-202ENST00000376839 TNFRSF13CQ96RJ3 184 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 APOOQ9BUR5 198 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 CACNG6Q9BXT2 260 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 GSDMCQ9BYG8 508 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 BEX1Q9HBH7 125 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 B3GNT2Q9NY97 397 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 MAT2BQ9NZL9 334 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 OR6C2Q9NZP2 312 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 KLF15Q9UIH9 416 aa12.21□□□□□ -0.45
ACTN1-202ENST00000376839 ELF5Q9UKW6 265 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-202ENST00000376839 KIAA0100Q14667 2235 aaKnown RBP12.21□□□□□ -0.45
ACTN1-202ENST00000376839 TBC1D3EA0A087X179 549 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 ADAM11O75078 769 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 TFP02787 698 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 NGFRP08138 427 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 VEGFBP49765 207 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 ANGPT1Q15389 498 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 ESCO2Q56NI9 601 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 TEX261Q6UWH6 196 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 USP53Q70EK8 1073 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 GET4Q7L5D6 327 aaPredicted RBP12.21□□□□□ -0.46
ACTN1-202ENST00000376839 CDK20Q8IZL9 346 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 OR14C36Q8NHC7 312 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 HAVCR2Q8TDQ0 301 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 ZMYND19Q96E35 227 aaPredicted RBP12.21□□□□□ -0.46
ACTN1-202ENST00000376839 OR2A5Q96R48 311 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 SLC17A9Q9BYT1 436 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.21□□□□□ -0.462e-6■■□□□ 14.2
ACTN1-202ENST00000376839 IL21RQ9HBE5 538 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 BRD7Q9NPI1 651 aa12.21□□□□□ -0.46
ACTN1-202ENST00000376839 FLRT3Q9NZU0 649 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms