RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 OR10K1Q8NGX5 313 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 DIP2CQ9Y2E4 1556 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 IL34Q6ZMJ4 242 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 OR56B1Q8NGI3 324 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 ACKR4Q9NPB9 350 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 ADAMTS6Q9UKP5 1117 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 MAKP20794 623 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 DEFB134Q4QY38 66 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 PKDCCQ504Y2 493 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 ZNF454Q8N9F8 522 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 SLC35D1Q9NTN3 355 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 ATP1B3P54709 279 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 PPP1R3AQ16821 1122 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 ZNF805Q5CZA5 627 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 AADACL3Q5VUY0 350 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 PRR11Q96HE9 360 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-205ENST00000376636 ESPL1Q14674 2120 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 NPIPA5A0A0B4J1W7 369 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 XKRY2A2RUG3 117 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 HIDE1A8MVS5 230 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 ZNF623O75123 536 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 C1GALT1C1LP0DN25 315 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 BMP2P12643 396 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 TIMP2P16035 220 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 NRMQ8IXM6 262 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 ANKMY1Q9P2S6 941 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 DDNO94850 711 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-205ENST00000376636 SLC35A2P78381 396 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 TFAP2BQ92481 460 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 PIGMQ9H3S5 423 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 DUSP22Q9NRW4 184 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 SLC35A3Q9Y2D2 325 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 A0A1W2PPH5 198 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 JUPP14923 745 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 HLA-DMAP28067 261 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 IL2RGP31785 369 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 EBPQ15125 230 aaKnown RBP10.97□□□□□ -0.65
VPS13A-205ENST00000376636 ACSM3Q53FZ2 586 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 DACT2Q5SW24 774 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 PET117Q6UWS5 81 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 CLDN19Q8N6F1 224 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 DCLRE1CQ96SD1 692 aaKnown RBP10.97□□□□□ -0.65
VPS13A-205ENST00000376636 BABAM2Q9NXR7 383 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 DNAJC13O75165 2243 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 SNRNP200O75643 2136 aaKnown RBP10.97□□□□□ -0.65
VPS13A-205ENST00000376636 TPRP12270 2363 aaKnown RBP10.97□□□□□ -0.65
VPS13A-205ENST00000376636 PPP1R3DO95685 299 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 CBX7O95931 251 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 SPP1P10451 314 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 AADACP22760 399 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 PAFAH1B3Q15102 231 aaKnown RBP10.97□□□□□ -0.65
VPS13A-205ENST00000376636 GDF6Q6KF10 455 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-205ENST00000376636 DCAF4L2Q8NA75 395 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 POLHQ9Y253 713 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 TMEM98Q9Y2Y6 226 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 C1orf167Q5SNV9 1468 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 POM121CA8CG34 1229 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 TERTO14746 1132 aaKnown RBP10.97□□□□□ -0.65
VPS13A-205ENST00000376636 KCNK5O95279 499 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 TECPR1Q7Z6L1 1165 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 TECPR2O15040 1411 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 TNFRSF10AO00220 468 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 PTBP3O95758 552 aaKnown RBP10.96□□□□□ -0.65
VPS13A-205ENST00000376636 GLB1P16278 677 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 CNR2P34972 360 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 AGTR2P50052 363 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 TREML2Q5T2D2 321 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 TMEM139Q8IV31 216 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 CPNE4Q96A23 557 aaPredicted RBP10.96□□□□□ -0.65
VPS13A-205ENST00000376636 ZNF689Q96CS4 500 aaPredicted RBP10.96□□□□□ -0.65
VPS13A-205ENST00000376636 PCDHA9Q9Y5H5 950 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 HSD17B1P14061 328 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 GGT5P36269 586 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 ZDHHC24Q6UX98 284 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 CRB3Q9BUF7 120 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 TM7SF3Q9NS93 570 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 HHLA2Q9UM44 414 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 HS3ST4Q9Y661 456 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 SEC14L5O43304 696 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 TUSC2O75896 110 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 OR2C1O95371 312 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 HPNP05981 417 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 CPN1P15169 458 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 KCNE1P15382 129 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 RAB13P51153 203 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 H3F3AP84243 136 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 SLC2A13Q96QE2 648 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 ENKD1Q9H0I2 346 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 ZNF487B1APH4 448 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 OR8U8P0C7N1 319 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 SERPINA2P20848 420 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 GKP32189 559 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 FAM122BQ7Z309 247 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 FAM185AQ8N0U4 392 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 C14orf79Q96F83 325 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 NGBQ9NPG2 151 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 RIPK3Q9Y572 518 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 NFAT5O94916 1531 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 MPC1LP0DKB6 136 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 EPHA4P54764 986 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms