RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SGCBQ16585 318 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 DUSP5Q16690 384 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.71□□□□□ -0.53
CLCN6-205ENST00000376492 CTU2Q2VPK5 515 aaKnown RBP11.71□□□□□ -0.53
CLCN6-205ENST00000376492 CDC73Q6P1J9 531 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 BHLHB9Q6PI77 547 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 SZRD1Q7Z422 152 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 ATG4DQ86TL0 474 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-205ENST00000376492 MARCH3Q86UD3 253 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 VPS37AQ8NEZ2 397 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 PIK3R3Q92569 461 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 SLC9A6Q92581 669 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 CMTM5Q96DZ9 223 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 OR52B2Q96RD2 323 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 ACTRT3Q9BYD9 372 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 SLCO5A1Q9H2Y9 848 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 PIGUQ9H490 435 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 SDR39U1Q9NRG7 319 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-205ENST00000376492 DUSP22Q9NRW4 184 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 FAM120CQ9NX05 1096 aaKnown RBP11.71□□□□□ -0.53
CLCN6-205ENST00000376492 ABCG2Q9UNQ0 655 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 MAGED1Q9Y5V3 778 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-205ENST00000376492 NUP214P35658 2090 aaPredicted RBP11.71□□□□□ -0.54
CLCN6-205ENST00000376492 E9PBE3 544 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 EIF1AYO14602 144 aaKnown RBP11.7□□□□□ -0.54
CLCN6-205ENST00000376492 CLOCKO15516 846 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 TLX2O43763 284 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-205ENST00000376492 ADAM11O75078 769 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 NDUFS7O75251 213 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 KCNK2O95069 426 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 IGKV1D-16P01601 117 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 OPN1LWP04000 364 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 KRT16P08779 473 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 DANCRP0C864 163 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 IL12AP29459 219 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 LCN1P31025 176 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 S100A3P33764 101 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 SQLEQ14534 574 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 LASP1Q14847 261 aaKnown RBP11.7□□□□□ -0.54
CLCN6-205ENST00000376492 MAPRE2Q15555 327 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 FAM174BQ3ZCQ3 159 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 SPDYE7PQ495Y7 208 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 PDCD4Q53EL6 469 aaKnown RBP11.7□□□□□ -0.54
CLCN6-205ENST00000376492 SPANXN4Q5MJ08 99 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 NXNQ6DKJ4 435 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 CLECL1Q8IZS7 167 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 GLB1L3Q8NCI6 653 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-205ENST00000376492 DUSP19Q8WTR2 217 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 GTPBP3Q969Y2 492 aaKnown RBP11.7□□□□□ -0.54
CLCN6-205ENST00000376492 GMPPAQ96IJ6 420 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-205ENST00000376492 CCDC106Q9BWC9 280 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 BTBD2Q9BX70 525 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 PRRG4Q9BZD6 226 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 C12orf49Q9H741 205 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 PTGES2Q9H7Z7 377 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 BTNL2Q9UIR0 455 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 PCDHGB4Q9UN71 923 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 FAF1Q9UNN5 650 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-205ENST00000376492 LIPT1Q9Y234 373 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 RNF115Q9Y4L5 304 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 AP4B1Q9Y6B7 739 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 CR1P17927 2039 aa11.7□□□□□ -0.54
CLCN6-205ENST00000376492 LINC01387J3KSC0 135 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 SLC22A3O75751 556 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 UTS2O95399 124 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 PGRP06401 933 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 NGFRP08138 427 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 CALB2P22676 271 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 IDUAP35475 653 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 RFX3P48380 749 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 CLK3P49761 638 aaKnown RBP11.69□□□□□ -0.54
CLCN6-205ENST00000376492 CTBP2P56545 445 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 NME5P56597 212 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 STX1BP61266 288 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 LRRC74AQ0VAA2 488 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 FAPQ12884 760 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 BNIP1Q12981 228 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 TP53BP2Q13625 1128 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 TSC22D1Q15714 1073 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 ETFDHQ16134 617 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 TMEM44Q2T9K0 475 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 CHRFAM7AQ494W8 412 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 COQ5Q5HYK3 327 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 CCDC121Q6ZUS5 278 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 C6orf120Q7Z4R8 191 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 ZNF619Q8N2I2 560 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 OR4A15Q8NGL6 344 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 OR10D3Q8NH80 312 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 RP9Q8TA86 221 aaKnown RBP11.69□□□□□ -0.54
CLCN6-205ENST00000376492 FBXW5Q969U6 566 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 S100PBPQ96BU1 408 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 TRMT61AQ96FX7 289 aaKnown RBP11.69□□□□□ -0.54
CLCN6-205ENST00000376492 CCDC115Q96NT0 180 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 ZBTB18Q99592 522 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 NPAS1Q99742 590 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 NMUR2Q9GZQ4 415 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 C1orf21Q9H246 121 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 SDHAF3Q9NRP4 125 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 ZIM2Q9NZV7 527 aa11.69□□□□□ -0.54
CLCN6-205ENST00000376492 GDF2Q9UK05 429 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms