RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 HSD17B2P37059 387 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 SELENOPP49908 381 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 ZP1P60852 638 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 RUNX3Q13761 415 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 ZIC1Q15915 447 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 SFRP4Q6FHJ7 346 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 MRM1Q6IN84 353 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 TMEM65Q6PI78 240 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 ZNF836Q6ZNA1 936 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 SSX6Q7RTT6 188 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 RFLNBQ8N5W9 214 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 OR51Q1Q8NH59 317 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 ADAMTS14Q8WXS8 1223 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 NR4A3Q92570 626 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 GCDHQ92947 438 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 MARVELD3Q96A59 401 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 COX14Q96I36 57 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 PRSS27Q9BQR3 290 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 NDC1Q9BTX1 674 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 CCDC86Q9H6F5 360 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 BRD7Q9NPI1 651 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 DEC1Q9P2X7 70 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 OR1A2Q9Y585 309 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 MEIKINA0A087WXM9 373 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 TEX51A0A1B0GUA7 166 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 OR5K3A6NET4 321 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 ZNF593O00488 134 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 SCAMP1O15126 338 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 SULT1A3P0DMM9 295 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 SULT1A4P0DMN0 295 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 RAB3BP20337 219 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 GJA4P35212 333 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 ZNF136P52737 540 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 RPL6Q02878 288 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 ZNF85Q03923 595 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 GPR68Q15743 365 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 AANATQ16613 207 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 ZNF527Q8NB42 609 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 PGLYRP3Q96LB9 341 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 ZNF681Q96N22 645 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 ACTRT3Q9BYD9 372 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 AUNIPQ9H7T9 357 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 NUP50Q9UKX7 468 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 PRELID1Q9Y255 219 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 SCN2AQ99250 2005 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 POLR2CP19387 275 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 PUDPQ08623 228 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 SNTB2Q13425 540 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 GRK1Q15835 563 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 TMEM35AQ53FP2 167 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 ERN2Q76MJ5 926 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 PXKQ7Z7A4 578 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 TPRA1Q86W33 373 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 OR4N5Q8IXE1 308 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 OR7G2Q8NG99 324 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 OR13C2Q8NGS9 318 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 OR2T35Q8NGX2 323 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 CXorf40AQ8TE69 158 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 OR8D1Q8WZ84 308 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 PIGKQ92643 395 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 NXPE2Q96DL1 559 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 HS6ST2Q96MM7 605 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 IFT27Q9BW83 186 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 SPRTNQ9H040 489 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 TMEM168Q9H0V1 697 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 CLEC4MQ9H2X3 399 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 SLC6A20Q9NP91 592 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 OR6C2Q9NZP2 312 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 PLEKHM1Q9Y4G2 1056 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 MDC1Q14676 2089 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 TBC1D3BA6NDS4 549 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 TRABD2BA6NFA1 517 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 IGLON5A6NGN9 336 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 OR52A4PA6NMU1 304 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 NARSO43776 548 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 BMP7P18075 431 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 HTR2AP28223 471 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 CDK3Q00526 305 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 FOXK2Q01167 660 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 HSF2Q03933 536 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 MFSD13AQ14CX5 517 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 MAPK14Q16539 360 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 YAF2Q8IY57 180 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 ARL14Q8N4G2 192 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 LSMEM1Q8N8F7 131 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 OR52L1Q8NGH7 329 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 OR51A7Q8NH64 312 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 BRIX1Q8TDN6 353 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 MOAP1Q96BY2 351 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 PEX11GQ96HA9 241 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 CD180Q99467 661 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 C1QTNF6Q9BXI9 259 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 C1QTNF7Q9BXJ2 289 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 RBCK1Q9BYM8 510 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 CHIAQ9BZP6 476 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 PITHD1Q9GZP4 211 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 METTL17Q9H7H0 456 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 CALML5Q9NZT1 146 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 APOBEC3BQ9UH17 382 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms