RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ZNF566Q969W8 418 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 PSD2Q9BQI7 771 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 GPR174Q9BXC1 333 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 GLIPR2Q9H4G4 154 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 GALNT9Q9HCQ5 603 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 ACER3Q9NUN7 267 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 MARCH5Q9NX47 278 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 SYT5O00445 386 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 NPC1O15118 1278 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 SYT7O43581 403 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 GPR75O95800 540 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 F11P03951 625 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 MMP11P24347 488 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 CXADRP78310 365 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 FCN2Q15485 313 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 AFMIDQ63HM1 303 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF852Q6ZMS4 543 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 SSX6Q7RTT6 188 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 HOXB13Q92826 284 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-203ENST00000375274 DEFB126Q9BYW3 111 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF304Q9HCX3 659 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 A4GALTQ9NPC4 353 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 ASF1BQ9NVP2 202 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 PGAP2Q9UHJ9 254 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 ARID1AO14497 2285 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF850A8MQ14 1090 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 I6L893 689 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-203ENST00000375274 TP53I11O14683 189 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 DNAJB6O75190 326 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 TRAPPC6AO75865 159 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 SULT1C4O75897 302 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 UBL3O95164 117 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 CPMP14384 443 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 HNRNPA2B1P22626 353 aaKnown RBP10.78□□□□□ -0.68
PTCH1-203ENST00000375274 GDNFP39905 211 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 XCR1P46094 333 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 MTNR1BP49286 362 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 P2RY14Q15391 338 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 AWAT2Q6E213 333 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF704Q6ZNC4 412 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-203ENST00000375274 TMEM185AQ8NFB2 350 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 OR5H2Q8NGV7 314 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 TM9SF4Q92544 642 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 TESQ9UGI8 421 aaKnown RBP10.78□□□□□ -0.68
PTCH1-203ENST00000375274 GLS2Q9UI32 602 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 SLC6A5Q9Y345 797 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 A0A0A6YYC8 382 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-203ENST00000375274 I3L1I5 382 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-203ENST00000375274 FBLP22087 321 aaKnown RBP10.78□□□□□ -0.68
PTCH1-203ENST00000375274 DLSTP36957 453 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 OPRD1P41143 372 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 PSPHP78330 225 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 GLO1Q04760 184 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 MFSD13AQ14CX5 517 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 TCTE1Q5JU00 501 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 HENMT1Q5T8I9 393 aaKnown RBP10.78□□□□□ -0.68
PTCH1-203ENST00000375274 GAREM2Q75VX8 874 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF765Q7L2R6 523 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 TMEM179BQ7Z7N9 219 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 C12orf45Q8N5I9 185 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-203ENST00000375274 TM4SF18Q96CE8 201 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 PPA2Q9H2U2 334 aa10.78□□□□□ -0.68
PTCH1-203ENST00000375274 ACOD1A6NK06 481 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 NPIPA2E9PIF3 369 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 NPIPA3F8WFD2 350 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 CRABP1P29762 137 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 TGFBR1P36897 503 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 DDOSTP39656 456 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 DEFB103AP81534 67 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 USF2Q15853 346 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-203ENST00000375274 TMEM151BQ8IW70 566 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 ARL14Q8N4G2 192 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 OR52R1Q8NGF1 315 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 FYTTD1Q96QD9 318 aaKnown RBP10.77□□□□□ -0.68
PTCH1-203ENST00000375274 INSM2Q96T92 566 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-203ENST00000375274 TIMM29Q9BSF4 260 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 PDFQ9HBH1 243 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 IL23AQ9NPF7 189 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 EDARQ9UNE0 448 aa10.77□□□□□ -0.68
PTCH1-203ENST00000375274 A6NL46 340 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 SGK494L7N484 410 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 SOCS6O14544 535 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 OR2T1O43869 369 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 MPIG6BO95866 241 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 C1QAP02745 245 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 TCRBP04435 133 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 CFIP05156 583 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 EPHA2P29317 976 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 RPL35P42766 123 aaKnown RBP10.77□□□□□ -0.69
PTCH1-203ENST00000375274 POU3F4P49335 361 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 ZNF84P51523 738 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 CRMP1Q14194 572 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 ARL6IP1Q15041 203 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 MBOAT2Q6ZWT7 520 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 USP53Q70EK8 1073 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 SLC35F3Q8IY50 421 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 PDXPQ96GD0 296 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 AMDHD1Q96NU7 426 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 CDCA4Q9BXL8 241 aa10.77□□□□□ -0.69
PTCH1-203ENST00000375274 GABARAPL1Q9H0R8 117 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms