RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 DGUOKQ16854 277 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TIMM50Q3ZCQ8 353 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TRIM61Q5EBN2 209 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 HLA-DQA1Q5Y7H0 255 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZNF385CQ66K41 422 aaPredicted RBP16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TUBA1AQ71U36 451 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SLC29A4Q7RTT9 530 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 BPHLQ86WA6 291 aaPredicted RBP16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ATCAYQ86WG3 371 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SLC38A9Q8NBW4 561 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 C3orf49Q96BT1 292 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 HSPBAP1Q96EW2 488 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 GAL3ST4Q96RP7 486 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SLC19A3Q9BZV2 496 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PLGRKTQ9HBL7 147 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 EXOSC1Q9Y3B2 195 aaKnown RBP16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 A0A1W2PQD3 144 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TMEM129A0AVI4 362 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 MYL12BO14950 172 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PRKNO60260 465 aaPredicted RBP16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TSPAN2O60636 221 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 IGF2P01344 180 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SYPP08247 313 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 HSMCR30P0CW71 290 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SERPINB10P48595 397 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CLK1P49759 484 aaKnown RBP16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ENTPD1P49961 510 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 DAB2P98082 770 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 MLLT11Q13015 90 aaPredicted RBP16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 C1DQ13901 141 aaKnown RBP16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CD226Q15762 336 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TSTQ16762 297 aaKnown RBP16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PWWP2BQ6NUJ5 590 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 LANCL3Q6ZV70 420 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 GID4Q8IVV7 300 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CACTIN-AS1Q8N1I8 211 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OR2I1PQ8NGU4 316 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZHX1-C8orf76Q96EF9 292 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 VMP1Q96GC9 406 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 HINT3Q9NQE9 182 aaKnown RBP16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 IL20RAQ9UHF4 553 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OSGIN1Q9UJX0 560 aa16.51■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TMEM221A6NGB7 291 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 M0R296 226 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZNF264O43296 627 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PPM1BO75688 479 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 MYL12AP19105 171 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 DCDP81605 110 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CRYZQ08257 329 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 FHL1Q13642 323 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SSX1Q16384 188 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 WBP2NLQ6ICG8 309 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 APOOLQ6UXV4 268 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 THSD4Q6ZMP0 1018 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SLCO6A1Q86UG4 719 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 DACH2Q96NX9 599 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 GFM1Q96RP9 751 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 JAM3Q9BX67 310 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SEMA4CQ9C0C4 833 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ENKD1Q9H0I2 346 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SYNDIG1Q9H7V2 258 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CMC2Q9NRP2 79 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PPIEQ9UNP9 301 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 EXOGQ9Y2C4 368 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 COL27A1Q8IZC6 1860 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 VSTM2BA6NLU5 285 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 NTN3O00634 580 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SLC2A10O95528 541 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PNMTP11086 282 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 FGF5P12034 268 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 IL12BP29460 328 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ETV5P41161 510 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SLC9A3P48764 834 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ETV1P50549 477 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PNLIPRP2P54317 469 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TRA2AQ13595 282 aaKnown RBP eCLIP16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZNF829Q3KNS6 432 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZNF528Q3MIS6 628 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 RTL4Q6ZR62 310 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 USP43Q70EL4 1123 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CXXC5Q7LFL8 322 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OVCH1Q7RTY7 1134 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ANKRD37Q7Z713 158 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OAFQ86UD1 273 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PPP1R3BQ86XI6 285 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 KBTBD8Q8NFY9 601 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PHOSPHO1Q8TCT1 267 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SGTBQ96EQ0 304 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ADOQ96SZ5 270 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 LAT2Q9GZY6 243 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 DCSTAMPQ9H295 470 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 MCCC2Q9HCC0 563 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ISYNA1Q9NPH2 558 aa16.5■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TRAV27A0A087WT01 109 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SAGE2PA6NJ88 616 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 IDSB3KWA1 339 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 D6RAR5 112 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OIP5O43482 229 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 FOXD2O60548 495 aaPredicted RBP16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ICOSLGO75144 302 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms