RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 PPA2Q9H2U2 334 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 MKS1Q9NXB0 559 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 C17orf113A0A1B0GUU1 675 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 TRAPPC13A5PLN9 417 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 SULT1C2O00338 296 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 EXOSC7Q15024 291 aaKnown RBP13.43□□□□□ -0.26
TRAF1-201ENST00000373887 MANEALQ5VSG8 457 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 PIANPQ8IYJ0 282 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 CPXM2Q8N436 756 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 RSPRY1Q96DX4 576 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 ACTRT3Q9BYD9 372 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 MYH10P35580 1976 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 A0A087WUU8 490 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 TMEM189-UBE2V1I3L0A0 370 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 RFPL3O75679 317 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 APEHP13798 732 aaKnown RBP13.43□□□□□ -0.26
TRAF1-201ENST00000373887 ARSBP15848 533 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 GAB1Q13480 694 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 MELKQ14680 651 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 SLC10A1Q14973 349 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 CD200R1Q8TD46 325 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 RNF32Q9H0A6 362 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 ZFP57Q9NU63 452 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 TSPAN11A1L157 253 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 ITGB2P05107 769 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 CLDN10P78369 228 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 NFATC3Q12968 1075 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 RCAN2Q14206 197 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 CPOQ8IVL8 374 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 SLC12A9Q9BXP2 914 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 IGSF5Q9NSI5 407 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 TXNL4BQ9NX01 149 aaKnown RBP13.42□□□□□ -0.26
TRAF1-201ENST00000373887 A0A1W2PS29 197 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 H3BNC9 293 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 FRS3O43559 492 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 HPGDSO60760 199 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 HLA-DMAP28067 261 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 TAS2R31P59538 309 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 BLOC1S3Q6QNY0 202 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 RNF128Q8TEB7 428 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 CAMK2AQ9UQM7 478 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 IER3IP1Q9Y5U9 82 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 AQP9O43315 295 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 GPR37L1O60883 481 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 AK1P00568 194 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 HOXB5P09067 269 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 OSMP13725 252 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 CRHBPP24387 322 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 CA5AP35218 305 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 C9orf135Q5VTT2 229 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 GAREM2Q75VX8 874 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 OR9A4Q8NGU2 314 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 TBC1D20Q96BZ9 403 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 TCEAL2Q9H3H9 227 aaPredicted RBP13.42□□□□□ -0.26
TRAF1-201ENST00000373887 OR14J1Q9UGF5 321 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 RPS10-NUDT3A0A1W2PQS6 291 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 TYROBPO43914 113 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 C1SP09871 688 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 RPS10P46783 165 aaKnown RBP13.42□□□□□ -0.26
TRAF1-201ENST00000373887 PIP5KL1Q5T9C9 394 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 TPRA1Q86W33 373 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 FAM160A2Q8N612 972 aaPredicted RBP13.42□□□□□ -0.26
TRAF1-201ENST00000373887 HORMAD2Q8N7B1 307 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 SLC6A18Q96N87 628 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 OR6C1Q96RD1 312 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 KLHL42Q9P2K6 505 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 MYH7P12883 1935 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 C4AP0C0L4 1744 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 LOC105369274A0A096LPK9 316 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 DNAJB5O75953 348 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 PABPC4LP0CB38 370 aaKnown RBP13.42□□□□□ -0.26
TRAF1-201ENST00000373887 M6PRP20645 277 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 OPRL1P41146 370 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 TGM4P49221 684 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 ZP2Q05996 745 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 MICAQ29983 383 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 EXOSC6Q5RKV6 272 aaKnown RBP13.42□□□□□ -0.26
TRAF1-201ENST00000373887 LETMD1Q6P1Q0 360 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 RFLNAQ6ZTI6 216 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 ZNF767PQ75MW2 155 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 PPP1R3BQ86XI6 285 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 OR4N4Q8N0Y3 316 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 NAGSQ8N159 534 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 PGAP3Q96FM1 320 aaPredicted RBP13.42□□□□□ -0.26
TRAF1-201ENST00000373887 ELF4Q99607 663 aaPredicted RBP13.42□□□□□ -0.26
TRAF1-201ENST00000373887 TPPP3Q9BW30 176 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 BTBD2Q9BX70 525 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 PCDHGA1Q9Y5H4 931 aa13.42□□□□□ -0.26
TRAF1-201ENST00000373887 DRGXA6NNA5 263 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 SOCS6O14544 535 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 HSPB6O14558 160 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 JRKO75564 520 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 MED6O75586 246 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 CSF1P09603 554 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 SLC22A6Q4U2R8 563 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 PRSS16Q9NQE7 514 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 THSD1Q9NS62 852 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 SGCEO43556 437 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 NPBWR1P48145 328 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 IL13RA1P78552 427 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms