RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 DNASE1P24855 282 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 MRPL19P49406 292 aaKnown RBP16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 CHRNEQ04844 493 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 TMEM176BQ3YBM2 270 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 AGBL2Q5U5Z8 902 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 TFAP2EQ6VUC0 442 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 PLEKHM3Q6ZWE6 761 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 RNF130Q86XS8 419 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 TGIF2LYQ8IUE0 185 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 GABRG1Q8N1C3 465 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 PIWIL2Q8TC59 973 aaKnown RBP16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 IGFBPL1Q8WX77 278 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 HS3ST6Q96QI5 342 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 CCDC106Q9BWC9 280 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 QRSL1Q9H0R6 528 aaKnown RBP16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 OR10A4Q9H209 315 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 BCO1Q9HAY6 547 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 ACER3Q9NUN7 267 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 KLHL13Q9P2N7 655 aa16.02■□□□□ 0.16
TRAPPC3-202ENST00000373162 DSPPQ9NZW4 1301 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 CLDN24A6NM45 220 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 GJE1A6NN92 205 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 SMAD9O15198 467 aaKnown RBP16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 KLF4O43474 513 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 UBTFL6P0CB48 400 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 ZCCHC18P0CG32 403 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 KITP10721 976 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 IDO1P14902 403 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 RAC3P60763 192 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 TXNL4AP83876 142 aaKnown RBP16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 LRRC74AQ0VAA2 488 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 SYPL1Q16563 259 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 DEFB113Q30KQ7 82 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 TIGD2Q4W5G0 525 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 COX20Q5RI15 118 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 C3orf33Q6P1S2 294 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 EIF3MQ7L2H7 374 aaKnown RBP16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 NUFIP2Q7Z417 695 aaKnown RBP16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 ANKFN1Q8N957 763 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 ZNF75CPQ92670 426 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 TRNT1Q96Q11 434 aaKnown RBP16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 OR52E6Q96RD3 313 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 PANX1Q96RD7 426 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 PSD2Q9BQI7 771 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 PRRG4Q9BZD6 226 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 ZIM2Q9NZV7 527 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 SLC35A3Q9Y2D2 325 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 VPS13CQ709C8 3753 aa16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 FLNAP21333 2647 aaKnown RBP16.01■□□□□ 0.15
TRAPPC3-202ENST00000373162 A0A1W2PNR3 127 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 AGAP5A6NIR3 686 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 ENPP1P22413 925 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 MAGEA8P43361 318 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 CTBP2P56545 445 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 RNPS1Q15287 305 aaKnown RBP16■□□□□ 0.15
TRAPPC3-202ENST00000373162 ATAD3BQ5T9A4 648 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 SEZ6L2Q6UXD5 910 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 LRRC74BQ6ZQY2 392 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 MSANTD1Q6ZTZ1 278 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 FCRLAQ7L513 359 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 TMCO5AQ8N6Q1 288 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 RFWD2Q8NHY2 731 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 MED18Q9BUE0 208 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 NKIRAS1Q9NYS0 192 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 ZNF226Q9NYT6 803 aa16■□□□□ 0.15
TRAPPC3-202ENST00000373162 NIPBLQ6KC79 2804 aaeCLIP16■□□□□ 0.15
TRAPPC3-202ENST00000373162 CYTIPO60759 359 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 PLGP00747 810 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 GSNP06396 782 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 PABPC4LP0CB38 370 aaKnown RBP15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 PPP3CBP16298 524 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 PGCP20142 388 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 EDNRAP25101 427 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 HOXC12P31275 282 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 CCR4P51679 360 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 ADAM8P78325 824 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 KCNJ10P78508 379 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 GSTA3Q16772 222 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 ABLIM2Q6H8Q1 611 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 EPGNQ6UW88 154 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 BEND4Q6ZU67 534 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 HMGN2P46Q86SG4 172 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 TUSC5Q8IXB3 177 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 OR9I1Q8NGQ6 314 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 CNOT9Q92600 299 aaKnown RBP15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 C7orf26Q96N11 449 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 TMEM204Q9BSN7 226 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 TIGARQ9NQ88 270 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 LIPT1Q9Y234 373 aa15.99■□□□□ 0.15
TRAPPC3-202ENST00000373162 FAAHO00519 579 aa15.98■□□□□ 0.15
TRAPPC3-202ENST00000373162 CASKO14936 926 aa15.98■□□□□ 0.15
TRAPPC3-202ENST00000373162 PRKD3O94806 890 aa15.98■□□□□ 0.15
TRAPPC3-202ENST00000373162 IL6P05231 212 aa15.98■□□□□ 0.15
TRAPPC3-202ENST00000373162 CHI3L1P36222 383 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC3-202ENST00000373162 EXOC3L2Q2M3D2 409 aa15.98■□□□□ 0.15
TRAPPC3-202ENST00000373162 GTDC1Q4AE62 458 aa15.98■□□□□ 0.15
TRAPPC3-202ENST00000373162 SYT14P1Q58G82 188 aa15.98■□□□□ 0.15
TRAPPC3-202ENST00000373162 TTMPQ5BVD1 217 aa15.98■□□□□ 0.15
TRAPPC3-202ENST00000373162 ANKRD34AQ69YU3 496 aa15.98■□□□□ 0.15
TRAPPC3-202ENST00000373162 GTF2IRD2BQ6EKJ0 949 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms