RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 KIR2DS3Q14952 304 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 PRICKLE4Q2TBC4 344 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 ZCCHC12Q6PEW1 402 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 ZNF767PQ75MW2 155 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 CDK20Q8IZL9 346 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 COX18Q8N8Q8 333 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 TMEM52Q8NDY8 209 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 HAVCR2Q8TDQ0 301 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 C17orf50Q8WW18 174 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 PMM1Q92871 262 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 ZNF426Q9BUY5 554 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 C1QTNF7Q9BXJ2 289 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 SLC6A17Q9H1V8 727 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 MRPS2Q9Y399 296 aaKnown RBP11.78□□□□□ -0.52
CTPS1-202ENST00000372621 NPFFR2Q9Y5X5 522 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 LOC105369274A0A096LPK9 316 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 A0A0B4J2E0 115 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 A0A1B0GX12 115 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 POM121BA6NF01 834 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 J3QLW9 94 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 FGF17O60258 216 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 LDB3O75112 727 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 ZNF19P17023 458 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 CAPZA2P47755 286 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 SRP9P49458 86 aaKnown RBP11.78□□□□□ -0.52
CTPS1-202ENST00000372621 NTRK2Q16620 822 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 ACSM3Q53FZ2 586 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 OR4N4Q8N0Y3 316 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 OR1E3Q8WZA6 343 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 SFXN1Q9H9B4 322 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 FLRT3Q9NZU0 649 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 HSPB11Q9Y547 144 aa11.78□□□□□ -0.52
CTPS1-202ENST00000372621 TRAV1-2A0A0B4J238 106 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 RIIAD1A6NNX1 92 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 HOXC4P09017 264 aaPredicted RBP11.77□□□□□ -0.52
CTPS1-202ENST00000372621 SAGP10523 405 aaPredicted RBP11.77□□□□□ -0.52
CTPS1-202ENST00000372621 UGT2B7P16662 529 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 ACVR1BP36896 505 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 HTRA3P83110 453 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 FCN2Q15485 313 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 BCL2L15Q5TBC7 163 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 FAM205BPQ63HN1 556 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 FIGNL1Q6PIW4 674 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 SLC44A3Q8N4M1 653 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 RFLNBQ8N5W9 214 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 OR5H6Q8NGV6 325 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 OR51A7Q8NH64 312 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 GHSRQ92847 366 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 ARSGQ96EG1 525 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 SLCO1C1Q9NYB5 712 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 MAT2BQ9NZL9 334 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 BAIAP2Q9UQB8 552 aa11.77□□□□□ -0.52
CTPS1-202ENST00000372621 A6NCN8 305 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 URADA6NGE7 173 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 K7EQS6 105 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 CYR61O00622 381 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 SLC31A1O15431 190 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 FABP7O15540 132 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 ADAM11O75078 769 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 PPP1R3DO95685 299 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 NGFRP08138 427 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 CT62P0C5K7 136 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 PEPDP12955 493 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 SLC16A1P53985 500 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 KIAA1024LP59773 190 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 PPP2CBP62714 309 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 PPP2CAP67775 309 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 ACTC1P68032 377 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 ACTA1P68133 377 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 MRPL28Q13084 256 aaKnown RBP11.77□□□□□ -0.53
CTPS1-202ENST00000372621 CEP78Q5JTW2 689 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 PRSS41Q7RTY9 318 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 ZAR1Q86SH2 424 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 TMEFF1Q8IYR6 380 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 MS4A15Q8N5U1 240 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 CYB561A3Q8NBI2 242 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 OR11H7Q8NGC8 314 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 OR13C5Q8NGS8 318 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 OR4C6Q8NH72 309 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 CCL4L1Q8NHW4 92 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 HERVK_113Q902F9 699 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 HOXB13Q92826 284 aaPredicted RBP11.77□□□□□ -0.53
CTPS1-202ENST00000372621 YIPF5Q969M3 257 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 CTHRC1Q96CG8 243 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 ZNF559Q9BR84 538 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 IRF2BPLQ9H1B7 796 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 MCCC2Q9HCC0 563 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 C14orf105Q9NVL8 296 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 FANCMQ8IYD8 2048 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 XIRP2A4UGR9 3374 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 GXYLT2A0PJZ3 443 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 ZNF860A6NHJ4 632 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 LRRC72A6NJI9 287 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 AK1P00568 194 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 IFI6P09912 130 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 ZNF3P17036 446 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 RAB3BP20337 219 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 MMP15P51511 669 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 TCEA2Q15560 299 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 ABHD13Q7L211 337 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms