RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ENAMQ9NRM1 1142 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 NDUFB11Q9NX14 153 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 TAS2R16Q9NYV7 291 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 CNIH4Q9P003 139 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 NUP210LQ5VU65 1888 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 LOC100506127A0A0U1RQW1 187 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 SAGE2PA6NJ88 616 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 H0YIG0 161 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 SURF4O15260 269 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 NUDT21O43809 227 aaKnown RBP12.98□□□□□ -0.33
LDB3-204ENST00000372066 PFDN1O60925 122 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 WISP1O95388 367 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 THY1P04216 161 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 DRD5P21918 477 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 GRK5P34947 590 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 ETV5P41161 510 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 GABRA4P48169 554 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 HSD17B7P56937 341 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 STX4Q12846 297 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 SERTAD2Q14140 314 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 EXOSC7Q15024 291 aaKnown RBP12.98□□□□□ -0.33
LDB3-204ENST00000372066 OR1Q1Q15612 314 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 SSX1Q16384 188 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 MAPK14Q16539 360 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 AMZ1Q400G9 498 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 ARMC4Q5T2S8 1044 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 DCDC5Q6ZRR9 648 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 ZBTB46Q86UZ6 589 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 CDK20Q8IZL9 346 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 ZSCAN1Q8NBB4 408 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 SIMC1Q8NDZ2 872 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 ANKK1Q8NFD2 765 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 OR52L1Q8NGH7 329 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 TMEM255BQ8WV15 326 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 PIK3R3Q92569 461 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 RIT1Q92963 219 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 DGAT2Q96PD7 388 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 MAP3K3Q99759 626 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 CHCHD6Q9BRQ6 235 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 FN3KQ9H479 309 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 TMEM27Q9HBJ8 222 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 HHATLQ9HCP6 504 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 PRTFDC1Q9NRG1 225 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.98□□□□□ -0.33
LDB3-204ENST00000372066 AKAP7Q9P0M2 348 aaPredicted RBP12.98□□□□□ -0.33
LDB3-204ENST00000372066 ZNF223Q9UK11 482 aaPredicted RBP12.98□□□□□ -0.33
LDB3-204ENST00000372066 STUB1Q9UNE7 303 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 PEX16Q9Y5Y5 336 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 COL27A1Q8IZC6 1860 aaPredicted RBP12.97□□□□□ -0.33
LDB3-204ENST00000372066 KIF26BQ2KJY2 2108 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 A0A0A6YYC8 382 aaPredicted RBP12.97□□□□□ -0.33
LDB3-204ENST00000372066 FITM1A5D6W6 292 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 UNC119BA6NIH7 251 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 RHPN2P1A8MT19 583 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 I3L1I5 382 aaPredicted RBP12.97□□□□□ -0.33
LDB3-204ENST00000372066 FOXS1O43638 330 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 KCNK2O95069 426 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 ADRA2AP08913 450 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 BMP4P12644 408 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 S1PR1P21453 382 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 S100A5P33763 92 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 RBM34P42696 430 aaKnown RBP12.97□□□□□ -0.33
LDB3-204ENST00000372066 MTNR1AP48039 350 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 PPP5CP53041 499 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 WNT4P56705 351 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 OR1D5P58170 312 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 COPZ1P61923 177 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 PRKCDQ05655 676 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 SLC13A2Q13183 592 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 FLYWCH1Q4VC44 716 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 NXNL2Q5VZ03 156 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 MED25Q71SY5 747 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 TMPRSS9Q7Z410 1059 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 VASH2Q86V25 355 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 GID4Q8IVV7 300 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 TMEM239Q8WW34 195 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 ZDHHC12Q96GR4 267 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 RBM18Q96H35 190 aaKnown RBP12.97□□□□□ -0.33
LDB3-204ENST00000372066 PRSS27Q9BQR3 290 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 G6PC3Q9BUM1 346 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 PRR14Q9BWN1 585 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 JAM3Q9BX67 310 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 PDE7BQ9NP56 450 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 STARD5Q9NSY2 213 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 GALNT8Q9NY28 637 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 FOXJ2Q9P0K8 574 aa12.97□□□□□ -0.33
LDB3-204ENST00000372066 A0A075B6Q4 140 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 PNMA8CA0A1B0GUJ8 204 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 HCRTR1O43613 425 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 CHP2O43745 196 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 RCBTB2O95199 551 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 LYPD3O95274 346 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 ITGB2P05107 769 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 OCM2P0CE71 109 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 OCMP0CE72 109 aaPredicted RBP12.96□□□□□ -0.33
LDB3-204ENST00000372066 CPEP16870 476 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 HTR2AP28223 471 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 GPR4P46093 362 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 GAS1P54826 345 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 CDH11P55287 796 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms