RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 LINC01599Q8WXQ3 324 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 ELP4Q96EB1 424 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 ZNF578Q96N58 590 aaPredicted RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 LMF1Q96S06 567 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 DPCDQ9BVM2 203 aaPredicted RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 PPIL3Q9H2H8 161 aaKnown RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC22A7Q9Y694 548 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 ARID1BQ8NFD5 2236 aaPredicted RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 GABRPO00591 440 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 SC5DO75845 299 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 GYPBP06028 91 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 HNRNPFP52597 415 aaKnown RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 SELENOVP59797 346 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 CYCSP99999 105 aaKnown RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 UNQ6126/PRO20091Q6UXV3 157 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 NOXA1Q86UR1 476 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 MMP28Q9H239 520 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 TNFRSF10CO14798 259 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 DIRAS3O95661 229 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 RAB3DO95716 219 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 RAB40ALP0C0E4 278 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 FPR3P25089 353 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 PKLRP30613 574 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 THBS2P35442 1172 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 MALLQ13021 153 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 COL9A2Q14055 689 aaPredicted RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 LRRC26Q2I0M4 334 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 C18orf63Q68DL7 685 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 TMPPEQ6ZT21 453 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 PRR22Q8IZ63 422 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC43A2Q8N370 569 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 OR6T1Q8NGN1 323 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 RAB40AQ8WXH6 277 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 NAT6Q93015 286 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 ZNF486Q96H40 463 aaPredicted RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 NIPSNAP1Q9BPW8 284 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 SACM1LQ9NTJ5 587 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 GLS2Q9UI32 602 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 RNF215Q9Y6U7 377 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 ZNF264O43296 627 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 PAHP00439 452 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 MAN2A2P49641 1150 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 NKX2-5P52952 324 aaPredicted RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 KIAA1211LQ6NV74 962 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 FAM111BQ6SJ93 734 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 CYHR1Q6ZMK1 362 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 TMEM150AQ86TG1 271 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 LAS2Q8IYD9 372 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 NINJ1Q92982 152 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 ZC3H10Q96K80 434 aaKnown RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 HHIPQ96QV1 700 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 DUSP23Q9BVJ7 150 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 ZDHHC5Q9C0B5 715 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 AMBRA1Q9C0C7 1298 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 SLA2Q9H6Q3 261 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 ATXN7L1Q9ULK2 861 aaPredicted RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 ATG4BQ9Y4P1 393 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 DCDC2BA2VCK2 349 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 I6L893 689 aaPredicted RBP11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 HPGDSO60760 199 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 OR2T7P0C7T2 308 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 HTR2AP28223 471 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 POU3F4P49335 361 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC35A2P78381 396 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 CDK10Q15131 360 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 AWAT2Q6E213 333 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 TBPL2Q6SJ96 375 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 GSG1LQ6UXU4 331 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 OR2T27Q8NH04 317 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 BRIX1Q8TDN6 353 aaKnown RBP11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 DEDD2Q8WXF8 326 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 BORCS8Q96FH0 119 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 ASB16Q96NS5 453 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 ECM29Q5VYK3 1845 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 GALR3O60755 368 aaPredicted RBP11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC35E2P0CK97 266 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 BMP4P12644 408 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 SSTR4P31391 388 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 CXCL12P48061 93 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 SNRPGP62308 76 aaKnown RBP11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 GAB1Q13480 694 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 MFSD12Q6NUT3 480 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 C5orf46Q6UWT4 87 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 CHRDL2Q6WN34 429 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 RABEPKQ7Z6M1 372 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 C19orf47Q8N9M1 422 aaKnown RBP11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 OR13C2Q8NGS9 318 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 ASB17Q8WXJ9 295 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 WBP2Q969T9 261 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 SPTSSAQ969W0 71 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 NXPE3Q969Y0 559 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 ZNF582Q96NG8 517 aaPredicted RBP11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 OR51J1Q9H342 316 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 SYNPO2LQ9H987 977 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 LRIT1Q9P2V4 623 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 TMEM202A6NGA9 273 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 TVP23AA6NH52 213 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 H3BML4 177 aa11.05□□□□□ -0.64
DEPDC1-201ENST00000370966 PEX11BO96011 259 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms