RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 MED31Q9Y3C7 131 aa21.79■■□□□ 1.08
SNX3-203ENST00000368979 CFAP54Q96N23 3096 aa21.78■■□□□ 1.08
SNX3-203ENST00000368979 MAGEA13PA6NCF6 341 aa21.78■■□□□ 1.08
SNX3-203ENST00000368979 PGCP20142 388 aa21.78■■□□□ 1.08
SNX3-203ENST00000368979 CASP3P42574 277 aa21.78■■□□□ 1.08
SNX3-203ENST00000368979 IL20RBQ6UXL0 311 aa21.78■■□□□ 1.08
SNX3-203ENST00000368979 ATG4DQ86TL0 474 aaPredicted RBP21.78■■□□□ 1.08
SNX3-203ENST00000368979 MEX3DQ86XN8 651 aaKnown RBP21.78■■□□□ 1.08
SNX3-203ENST00000368979 SETD9Q8NE22 299 aa21.78■■□□□ 1.08
SNX3-203ENST00000368979 ZNF563Q8TA94 476 aa21.78■■□□□ 1.08
SNX3-203ENST00000368979 METTL7AQ9H8H3 244 aa21.78■■□□□ 1.08
SNX3-203ENST00000368979 MEPEQ9NQ76 525 aaPredicted RBP21.78■■□□□ 1.08
SNX3-203ENST00000368979 HSPE1-MOB4S4R3N1 261 aa21.78■■□□□ 1.08
SNX3-203ENST00000368979 HEATR5AQ86XA9 2040 aa21.78■■□□□ 1.08
SNX3-203ENST00000368979 IGLV3-32A0A0A0MS00 114 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 DCDC2BA2VCK2 349 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 ZAR1LA6NP61 321 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 SOX14O95416 240 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 ITPKBP27987 946 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 GGT2P36268 569 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 SLC1A3P43003 542 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 GPR4P46093 362 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 TPD52P55327 224 aaPredicted RBP21.77■■□□□ 1.08
SNX3-203ENST00000368979 SUMO3P55854 103 aaPredicted RBP21.77■■□□□ 1.08
SNX3-203ENST00000368979 CTBP2P56545 445 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 ISL1P61371 349 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 PTGES3Q15185 160 aaKnown RBP21.77■■□□□ 1.08
SNX3-203ENST00000368979 COL28A1Q2UY09 1125 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 B3GNTL1Q67FW5 361 aaPredicted RBP21.77■■□□□ 1.08
SNX3-203ENST00000368979 CCDC71Q8IV32 467 aaPredicted RBP21.77■■□□□ 1.08
SNX3-203ENST00000368979 SIRT6Q8N6T7 355 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 GPR119Q8TDV5 335 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 THOC3Q96J01 351 aaKnown RBP21.77■■□□□ 1.08
SNX3-203ENST00000368979 ADAM19Q9H013 955 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 C12orf10Q9HB07 376 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 SH2D2AQ9NP31 389 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 C20orf141Q9NUB4 165 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 WIF1Q9Y5W5 379 aa21.77■■□□□ 1.08
SNX3-203ENST00000368979 B4DXG7 233 aa21.76■■□□□ 1.07
SNX3-203ENST00000368979 GMFGO60234 142 aa21.76■■□□□ 1.07
SNX3-203ENST00000368979 PNMTP11086 282 aa21.76■■□□□ 1.07
SNX3-203ENST00000368979 ST13P50502 369 aaKnown RBP21.76■■□□□ 1.07
SNX3-203ENST00000368979 SNTA1Q13424 505 aa21.76■■□□□ 1.07
SNX3-203ENST00000368979 TOMM34Q15785 309 aaPredicted RBP21.76■■□□□ 1.07
SNX3-203ENST00000368979 TTC33Q6PID6 262 aaPredicted RBP21.76■■□□□ 1.07
SNX3-203ENST00000368979 RASSF6Q6ZTQ3 369 aa21.76■■□□□ 1.07
SNX3-203ENST00000368979 TMEM156Q8N614 296 aa21.76■■□□□ 1.07
SNX3-203ENST00000368979 FBLIM1Q8WUP2 373 aa21.76■■□□□ 1.07
SNX3-203ENST00000368979 APOL4Q9BPW4 351 aa21.76■■□□□ 1.07
SNX3-203ENST00000368979 CPNE5Q9HCH3 593 aa21.76■■□□□ 1.07
SNX3-203ENST00000368979 SDHAF3Q9NRP4 125 aa21.76■■□□□ 1.07
SNX3-203ENST00000368979 TMEM5Q9Y2B1 443 aa21.76■■□□□ 1.07
SNX3-203ENST00000368979 C2orf72A6NCS6 295 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 ANKUB1A6NFN9 424 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 KPNA4O00629 521 aaPredicted RBP21.75■■□□□ 1.07
SNX3-203ENST00000368979 IGFBP1P08833 259 aaPredicted RBP21.75■■□□□ 1.07
SNX3-203ENST00000368979 IFI30P13284 250 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 NUP107P57740 925 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 CD47Q08722 323 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 AIMP2Q13155 320 aaKnown RBP21.75■■□□□ 1.07
SNX3-203ENST00000368979 MEP1AQ16819 746 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 ACER2Q5QJU3 275 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 ISLR2Q6UXK2 745 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 TMPRSS11FQ6ZWK6 438 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 VASH2Q86V25 355 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 KIF18BQ86Y91 864 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 PAQR8Q8TEZ7 354 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 NTNG2Q96CW9 530 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 NXPE2Q96DL1 559 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 FER1L6-AS2Q96M78 137 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 DSN1Q9H410 356 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 HPF1Q9NWY4 346 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 HRH3Q9Y5N1 445 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 CDC42EP2O14613 210 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 TNFAIP8O95379 198 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 NUDT14O95848 222 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 MAKP20794 623 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 SDHBP21912 280 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 QPRTQ15274 297 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 CTU2Q2VPK5 515 aaKnown RBP21.75■■□□□ 1.07
SNX3-203ENST00000368979 ZNF468Q5VIY5 522 aaPredicted RBP21.75■■□□□ 1.07
SNX3-203ENST00000368979 BPIFA2Q96DR5 249 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 FRMD6Q96NE9 622 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 ZNF696Q9H7X3 374 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 ATP13A2Q9NQ11 1180 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 PPP4R1LQ9P1A2 415 aa21.75■■□□□ 1.07
SNX3-203ENST00000368979 IGKV1D-42A0A075B6H8 117 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 TRABD2BA6NFA1 517 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 ELOA3DA6NLF2 546 aaPredicted RBP21.74■■□□□ 1.07
SNX3-203ENST00000368979 H3BN98 237 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 GNB5O14775 395 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 CDC40O60508 579 aaKnown RBP eCLIP21.74■■□□□ 1.07
SNX3-203ENST00000368979 POU1F1P28069 291 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 MSX1P28360 303 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 TACR3P29371 465 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 IL5RAQ01344 420 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 ELOA3BQ3SY89 546 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 OR5M10Q6IEU7 315 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 SLC30A6Q6NXT4 461 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 ELOA3Q8NG57 546 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms