RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 TDRPQ86YL5 185 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 SLC43A2Q8N370 569 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 TOR1AIP2Q8NFQ8 470 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 OR56A1Q8NGH5 318 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 OR5D16Q8NGK9 328 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 OR2W6PQ8NHA6 318 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 KIF18AQ8NI77 898 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 GPR119Q8TDV5 335 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 ZNF524Q96C55 264 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 MRGPRX4Q96LA9 322 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 PPP3R2Q96LZ3 170 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 OR5B2Q96R09 309 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 OR7D2Q96RA2 312 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 ZNF300Q96RE9 604 aaPredicted RBP9.17□□□□□ -0.94
CLRN3-201ENST00000368671 PSD2Q9BQI7 771 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 MECRQ9BV79 373 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 REG4Q9BYZ8 158 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 QRSL1Q9H0R6 528 aaKnown RBP9.17□□□□□ -0.94
CLRN3-201ENST00000368671 SLCO5A1Q9H2Y9 848 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 GP6Q9HCN6 339 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 KLHL9Q9P2J3 617 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 DTNAQ9Y4J8 743 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 ACTL7BQ9Y614 415 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 CR1P17927 2039 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 CHD3Q12873 2000 aaKnown RBP9.17□□□□□ -0.94
CLRN3-201ENST00000368671 TLDC2A0PJX2 215 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 SMAD9O15198 467 aaKnown RBP9.16□□□□□ -0.94
CLRN3-201ENST00000368671 ZNF264O43296 627 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 NPHS1O60500 1241 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 NDUFS7O75251 213 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 SKAP2O75563 359 aaPredicted RBP9.16□□□□□ -0.94
CLRN3-201ENST00000368671 SLU7O95391 586 aaKnown RBP9.16□□□□□ -0.94
CLRN3-201ENST00000368671 H6PDO95479 791 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 IGHV4-39P01824 125 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 FGF4P08620 206 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 PTNP21246 168 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 EDNRAP25101 427 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 OR3A2P47893 321 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 RAC3P60763 192 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 RASGEF1BQ0VAM2 473 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 CBFBQ13951 182 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 P2RY6Q15077 328 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 PPA1Q15181 289 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 GPR68Q15743 365 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 ETFDHQ16134 617 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 PGGHGQ32M88 737 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 LSM12Q3MHD2 195 aaKnown RBP9.16□□□□□ -0.94
CLRN3-201ENST00000368671 UGT3A2Q3SY77 523 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 ATP6AP1LQ52LC2 224 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 PDZK1Q5T2W1 519 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 HEPHL1Q6MZM0 1159 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 C3orf33Q6P1S2 294 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 SEZ6L2Q6UXD5 910 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 ZCCHC23Q6ZST2 131 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 OLIG3Q7RTU3 272 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 KRTCAP2Q8N6L1 136 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 FNDC5Q8NAU1 212 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 OR5W2Q8NH69 310 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 PIWIL2Q8TC59 973 aaKnown RBP9.16□□□□□ -0.94
CLRN3-201ENST00000368671 APOPT1Q96IL0 206 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 HS6ST2Q96MM7 605 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 THUMPD3Q9BV44 507 aaKnown RBP9.16□□□□□ -0.94
CLRN3-201ENST00000368671 L2HGDHQ9H9P8 463 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 PPCSQ9HAB8 311 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 BCO1Q9HAY6 547 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 EML4Q9HC35 981 aaKnown RBP9.16□□□□□ -0.94
CLRN3-201ENST00000368671 YAE1D1Q9NRH1 226 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 ATAD3AQ9NVI7 634 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 GPATCH2Q9NW75 528 aa9.16□□□□□ -0.94
CLRN3-201ENST00000368671 GDF2Q9UK05 429 aaPredicted RBP9.16□□□□□ -0.94
CLRN3-201ENST00000368671 ING1Q9UK53 422 aaPredicted RBP9.16□□□□□ -0.94
CLRN3-201ENST00000368671 FN1P02751 2386 aaKnown RBP9.16□□□□□ -0.94
CLRN3-201ENST00000368671 SERINC4A6NH21 518 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 NPIPB9F8W1W9 429 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 EIF4E2O60573 245 aaKnown RBP9.15□□□□□ -0.94
CLRN3-201ENST00000368671 CYTIPO60759 359 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 RAMP1O60894 148 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 ADAM11O75078 769 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 FESP07332 822 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 IGHV1-2P23083 117 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 CDH11P55287 796 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 C21orf58P58505 322 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 RPS26P62854 115 aaKnown RBP9.15□□□□□ -0.94
CLRN3-201ENST00000368671 TIGD2Q4W5G0 525 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 XKR7Q5GH72 579 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 SLC25A53Q5H9E4 307 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 C6orf136Q5SQH8 315 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 IL23RQ5VWK5 629 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 HMBOX1Q6NT76 420 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 Q6ZT83 130 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 HOMEZQ8IX15 550 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 ZNF100Q8IYN0 542 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 ALDH16A1Q8IZ83 802 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 CLEC4FQ8N1N0 589 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 NATD1Q8N6N6 113 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 SPATA3Q8NHX4 192 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 PSMA8Q8TAA3 256 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 SFXN5Q8TD22 340 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 ARL8AQ96BM9 186 aa9.15□□□□□ -0.94
CLRN3-201ENST00000368671 MOAP1Q96BY2 351 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms