RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 SCGB1D2O95969 90 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 PAHP00439 452 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 UBL4AP11441 157 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 OPRD1P41143 372 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 NR0B1P51843 470 aaKnown RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 PSPHP78330 225 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 CCDC58Q4VC31 144 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 METTL11BQ5VVY1 283 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 LHX8Q68G74 356 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 LILRB4Q8NHJ6 448 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 SYNPRQ8TBG9 265 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 ZNF350Q9GZX5 532 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 TMEM168Q9H0V1 697 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 MBNL1Q9NR56 388 aaKnown RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 SAGE1Q9NXZ1 904 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 THAP10Q9P2Z0 257 aaPredicted RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 BOLA1Q9Y3E2 137 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 NUP214P35658 2090 aaPredicted RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 CCDC85CA6NKD9 419 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 SDC3O75056 442 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 LGI1O95970 557 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 CTSLP07711 333 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 SNRPBP14678 240 aaKnown RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 UQCRC1P31930 480 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 GRK5P34947 590 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 CCINQ13939 588 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 CARD17Q5XLA6 110 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 ASTLQ6HA08 431 aaPredicted RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 ACSM5Q6NUN0 579 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 MFSD12Q6NUT3 480 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 ZNF322Q6U7Q0 402 aaPredicted RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 TMEM205Q6UW68 189 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 SPAG16Q8N0X2 631 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 BEST3Q8N1M1 668 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 GPR148Q8TDV2 347 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 ELMOD3Q96FG2 381 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 TNFRSF13CQ96RJ3 184 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 SIRT5Q9NXA8 310 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 C19orf25Q9UFG5 118 aaPredicted RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 OR51B4Q9Y5P0 310 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 KIR2DS5A0A0G2JLQ3 304 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 A0A0G2JNG1 304 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 TEX13DA0A0J9YY54 714 aaPredicted RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 KIR2DS3K7RE56 304 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 HOXC11O43248 304 aaPredicted RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 DUX1O43812 170 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 AMY2AP04746 511 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 CCR2P41597 374 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 RAB2AP61019 212 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 TEKQ02763 1124 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 ERV3-1Q14264 604 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 KIR2DS5Q14953 304 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 TCTN3Q6NUS6 607 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 COMMD7Q86VX2 200 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 NKAIN4Q8IVV8 208 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 KLHDC8BQ8IXV7 354 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 OR5T3Q8NGG3 340 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 TM9SF4Q92544 642 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 COQ10AQ96MF6 247 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 C8orf33Q9H7E9 229 aaPredicted RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 PPP4R1LQ9P1A2 415 aa10.89□□□□□ -0.67
COPA-202ENST00000368069 C14orf166Q9Y224 244 aaKnown RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 COL11A1P12107 1806 aaPredicted RBP10.89□□□□□ -0.67
COPA-202ENST00000368069 A0A087WUU8 490 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 TRDV1A0A1B0GX56 115 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 PRAMEF26H0Y7S4 382 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 MEN1O00255 615 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 FZD7O75084 574 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 PRSS3P35030 304 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 ACTBP60709 375 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 ACTG1P63261 375 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 OC90Q02509 493 aaPredicted RBP10.88□□□□□ -0.67
COPA-202ENST00000368069 CRMP1Q14194 572 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 FAM205BPQ63HN1 556 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 C8orf82Q6P1X6 216 aaPredicted RBP10.88□□□□□ -0.67
COPA-202ENST00000368069 ADAMTS14Q8WXS8 1223 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 HHIPL1Q96JK4 782 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 SPNS1Q9H2V7 528 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 ABRACLQ9P1F3 81 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 CBLCQ9ULV8 474 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.88□□□□□ -0.67
COPA-202ENST00000368069 ZNF337Q9Y3M9 751 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 V9GY05 133 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 POLR2AP24928 1970 aaKnown RBP10.88□□□□□ -0.67
COPA-202ENST00000368069 NAP1L6A6NFF2 107 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 F5H0A9 414 aaPredicted RBP10.88□□□□□ -0.67
COPA-202ENST00000368069 NARSO43776 548 aaKnown RBP10.88□□□□□ -0.67
COPA-202ENST00000368069 BMP1P13497 986 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 MAOBP27338 520 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 CTBP2P56545 445 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 TMEM31Q5JXX7 168 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 GDPD3Q7L5L3 318 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 TRIM43Q96BQ3 446 aaPredicted RBP10.88□□□□□ -0.67
COPA-202ENST00000368069 KCTD12Q96CX2 325 aaKnown RBP10.88□□□□□ -0.67
COPA-202ENST00000368069 MS4A6EQ96DS6 147 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 UBQLN3Q9H347 655 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 POLE3Q9NRF9 147 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 ASB6Q9NWX5 421 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 NUP50Q9UKX7 468 aa10.88□□□□□ -0.67
COPA-202ENST00000368069 UGT2A1Q9Y4X1 527 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms