RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 BOD1L1Q8NFC6 3051 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 A0A087WUU8 490 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 LOC105371267A0A1B0GV96 52 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 A0A1W2PQ72 361 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 PRAMEF27A3QJZ7 478 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 CPED1A4D0V7 1026 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 OR5K3A6NET4 321 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 LEUTXA8MZ59 168 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 ISM1B1AKI9 464 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 J3QRE1 110 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 GTPBP1O00178 669 aaKnown RBP10.68□□□□□ -0.7
USF1-201ENST00000368019 SURF4O15260 269 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 KLF4O43474 513 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 CHP2O43745 196 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 SLC22A5O76082 557 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 EPPINO95925 133 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 TBX6O95947 436 aaPredicted RBP10.68□□□□□ -0.7
USF1-201ENST00000368019 GBAP04062 536 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 ELFN1P0C7U0 828 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 OR12D1P0DN82 309 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 ANXA3P12429 323 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 NPR2P20594 1047 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 STOMP27105 288 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 NTSP30990 170 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 OMPP47874 163 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 CCR8P51685 355 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 PER3P56645 1201 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 TMPRSS3P57727 454 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 SGCGQ13326 291 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 GPR176Q14439 515 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 DEFB133Q30KQ1 61 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 PGGHGQ32M88 737 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 TMEM35AQ53FP2 167 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 CDC73Q6P1J9 531 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 PAMR1Q6UXH9 720 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 BCDIN3DQ7Z5W3 292 aaKnown RBP10.68□□□□□ -0.7
USF1-201ENST00000368019 OAFQ86UD1 273 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 SLC43A2Q8N370 569 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 LILRA3Q8N6C8 439 aaPredicted RBP10.68□□□□□ -0.7
USF1-201ENST00000368019 KCNE4Q8WWG9 221 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 ACOT11Q8WXI4 607 aaPredicted RBP10.68□□□□□ -0.7
USF1-201ENST00000368019 GATAD2BQ8WXI9 593 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 SLC9A6Q92581 669 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 RAB8BQ92930 207 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 TMEM203Q969S6 136 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 OTUB1Q96FW1 271 aaPredicted RBP10.68□□□□□ -0.7
USF1-201ENST00000368019 MED28Q9H204 178 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 OR52A5Q9H2C5 316 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 TCEAL2Q9H3H9 227 aaPredicted RBP10.68□□□□□ -0.7
USF1-201ENST00000368019 GHITMQ9H3K2 345 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 EVA1AQ9H8M9 152 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 HSPB11Q9Y547 144 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 CACNG2Q9Y698 323 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 CLCA3PQ9Y6N3 262 aa10.68□□□□□ -0.7
USF1-201ENST00000368019 A0A0A6YYD5 115 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 GSAPA4D1B5 854 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 CDRT15L2A8MXV6 281 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 LMO7DNF2Z398 122 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 M0R3H8 397 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 SAP18O00422 153 aaKnown RBP10.67□□□□□ -0.7
USF1-201ENST00000368019 NDUFS4O43181 175 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 KLK10O43240 276 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 RNF13O43567 381 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 OR5F1O95221 314 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 RAF1P04049 648 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 SERPIND1P05546 499 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 ACP5P13686 325 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 UGT2B7P16662 529 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 AHCYP23526 432 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 PRKAR1BP31321 381 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 IGFALSP35858 605 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 RPS26P62854 115 aaKnown RBP10.67□□□□□ -0.7
USF1-201ENST00000368019 PITPNAQ00169 270 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 SYPL1Q16563 259 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 CLLU1Q5K131 121 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 ARHGAP40Q5TG30 622 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 ZNF57Q68EA5 555 aaPredicted RBP10.67□□□□□ -0.7
USF1-201ENST00000368019 RPL13AP3Q6NVV1 102 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 ZNF322Q6U7Q0 402 aaPredicted RBP10.67□□□□□ -0.7
USF1-201ENST00000368019 FGD2Q7Z6J4 655 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 LUZP2Q86TE4 346 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 RBM45Q8IUH3 476 aaKnown RBP10.67□□□□□ -0.7
USF1-201ENST00000368019 GPALPP1Q8IXQ4 340 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 CMIPQ8IY22 773 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 SLC35F3Q8IY50 421 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 CFAP206Q8IYR0 622 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 OR8D4Q8NGM9 314 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 OR6T1Q8NGN1 323 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 LMX1AQ8TE12 382 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 SENP5Q96HI0 755 aaPredicted RBP10.67□□□□□ -0.7
USF1-201ENST00000368019 AHCYL2Q96HN2 611 aaKnown RBP10.67□□□□□ -0.7
USF1-201ENST00000368019 TM9SF2Q99805 663 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 BEX2Q9BXY8 128 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 PLA2G12AQ9BZM1 189 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 ACTR6Q9GZN1 396 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 OSGEPL1Q9H4B0 414 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 GLIPR2Q9H4G4 154 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 EXTL2Q9UBQ6 330 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 TEKT2Q9UIF3 430 aa10.67□□□□□ -0.7
USF1-201ENST00000368019 NPFFR2Q9Y5X5 522 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms