RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 RAB8AP61006 207 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 PUDPQ08623 228 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 SIGLEC14Q08ET2 396 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 HSD17B12Q53GQ0 312 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 RTL4Q6ZR62 310 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 GPR135Q8IZ08 494 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 BMPERQ8N8U9 685 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 GANCQ8TET4 914 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 HMGB4Q8WW32 186 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 SPRYD4Q8WW59 207 aaPredicted RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 NXPE2Q96DL1 559 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 GIMAP5Q96F15 307 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 RADILQ96JH8 1075 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 SECISBP2Q96T21 854 aaKnown RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 ACTRT3Q9BYD9 372 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 PPA2Q9H2U2 334 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 C6orf106Q9H6K1 298 aaPredicted RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 CD93Q9NPY3 652 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 LYARQ9NX58 379 aaKnown RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 PCDH8O95206 1070 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 SSTR2P30874 369 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 SRP54P61011 504 aaKnown RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 DBPQ10586 325 aaPredicted RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 SLC36A2Q495M3 483 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 GID4Q8IVV7 300 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 OR2T33Q8NG76 320 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 CEP76Q8TAP6 659 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 KAT2AQ92830 837 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 EDAQ92838 391 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 RBPMSQ93062 196 aaKnown RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 KCTD12Q96CX2 325 aaKnown RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 TOE1Q96GM8 510 aaKnown RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 FN3KQ9H479 309 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 KRCC1Q9NPI7 259 aaPredicted RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 ZNF624Q9P2J8 865 aaPredicted RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 SIT1Q9Y3P8 196 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 GOLGA4Q13439 2230 aaKnown RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 VCANP13611 3396 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 LOC105369274A0A096LPK9 316 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 PLRG1O43660 514 aaKnown RBP13.62□□□□□ -0.23
PRKN-204ENST00000366896 FCMRO60667 390 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 SULT1A3P0DMM9 295 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 SULT1A4P0DMN0 295 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 DNASE1P24855 282 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 THBS2P35442 1172 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 SRP9P49458 86 aaKnown RBP13.62□□□□□ -0.23
PRKN-204ENST00000366896 RAB14P61106 215 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 C6orf132Q5T0Z8 1188 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 ZNF322Q6U7Q0 402 aaPredicted RBP13.62□□□□□ -0.23
PRKN-204ENST00000366896 KRT74Q7RTS7 529 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 DGLUCYQ7Z3D6 616 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 OR4N4Q8N0Y3 316 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 DTX3Q8N9I9 347 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 DLL4Q9NR61 685 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 KCMF1Q9P0J7 381 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 ZFR2Q9UPR6 939 aaKnown RBP13.62□□□□□ -0.23
PRKN-204ENST00000366896 TRPM6Q9BX84 2022 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 SNRNP200O75643 2136 aaKnown RBP13.62□□□□□ -0.23
PRKN-204ENST00000366896 GPR171O14626 319 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 RGS9O75916 674 aaPredicted RBP13.62□□□□□ -0.23
PRKN-204ENST00000366896 CFDP00746 253 aaPredicted RBP13.62□□□□□ -0.23
PRKN-204ENST00000366896 PDGFBP01127 241 aaPredicted RBP13.62□□□□□ -0.23
PRKN-204ENST00000366896 SYPP08247 313 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 NPR2P20594 1047 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 ACSL1P33121 698 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 PDX1P52945 283 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 ADPRHP54922 357 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 SNRPNP63162 240 aaKnown RBP13.62□□□□□ -0.23
PRKN-204ENST00000366896 IRF4Q15306 451 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 IL20RBQ6UXL0 311 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 NRMQ8IXM6 262 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 SPEM1Q8N4L4 309 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 SAMD12Q8N8I0 201 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 MFSD9Q8NBP5 474 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 TSTD1Q8NFU3 115 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 BRIX1Q8TDN6 353 aaKnown RBP13.62□□□□□ -0.23
PRKN-204ENST00000366896 TMEM255BQ8WV15 326 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 ABHD1Q96SE0 405 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 GSX2Q9BZM3 304 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 WDR26Q9H7D7 661 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 MTHFD2LQ9H903 347 aaPredicted RBP13.62□□□□□ -0.23
PRKN-204ENST00000366896 SPHK1Q9NYA1 384 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 CSNK1G3Q9Y6M4 447 aa13.62□□□□□ -0.23
PRKN-204ENST00000366896 TBC1D3KA0A087X1G2 549 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 TBC1D3FA6NER0 549 aaPredicted RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 SOCS6O14544 535 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 KHNYNO15037 678 aaKnown RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 DCNP07585 359 aaKnown RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 IL32P24001 234 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 PEBP1P30086 187 aaKnown RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 TPMTP51580 245 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 CLDN2P57739 230 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 RGS8P57771 180 aaPredicted RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 STXBP1P61764 594 aaKnown RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 SHC2P98077 582 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 FGL2Q14314 439 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 TBC1D3GQ6DHY5 549 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 PYHIN1Q6K0P9 492 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 LYPD4Q6UWN0 246 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 GDF7Q7Z4P5 450 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms