RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 ABTB1Q969K4 478 aaPredicted RBP6.28□□□□□ -1.4
H3F3A-201ENST00000366813 C11orf24Q96F05 449 aaPredicted RBP6.28□□□□□ -1.4
H3F3A-201ENST00000366813 PGM2Q96G03 612 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 DNAJC1Q96KC8 554 aaKnown RBP6.28□□□□□ -1.4
H3F3A-201ENST00000366813 ZNF570Q96NI8 536 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 BTBD9Q96Q07 612 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 RBM4Q9BWF3 364 aaKnown RBP6.28□□□□□ -1.4
H3F3A-201ENST00000366813 ADAP2Q9NPF8 381 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 ABCF3Q9NUQ8 709 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 MED29Q9NX70 200 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 CORO1CQ9ULV4 474 aaPredicted RBP6.28□□□□□ -1.4
H3F3A-201ENST00000366813 PPIEQ9UNP9 301 aaKnown RBP6.28□□□□□ -1.4
H3F3A-201ENST00000366813 LYVE1Q9Y5Y7 322 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 IGHV4-28A0A0C4DH34 117 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 IQCF5A8MTL0 148 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 GTPBP1O00178 669 aaKnown RBP6.27□□□□□ -1.41
H3F3A-201ENST00000366813 CDC7O00311 574 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 WNT9BO14905 357 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 TIMM23O14925 209 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 OR1I1O60431 355 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 DOK2O60496 412 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 GPC4O75487 556 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 TGM6O95932 706 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 C1QAP02745 245 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 OR56A5P0C7T3 313 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 CDH2P19022 906 aaPredicted RBP6.27□□□□□ -1.41
H3F3A-201ENST00000366813 HOXD3P31249 432 aaPredicted RBP6.27□□□□□ -1.41
H3F3A-201ENST00000366813 ARRB2P32121 409 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 NAGLUP54802 743 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 SIRPAP78324 504 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 RELAQ04206 551 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 PRDX1Q06830 199 aaKnown RBP6.27□□□□□ -1.41
H3F3A-201ENST00000366813 EXOC3L2Q2M3D2 409 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 C2orf68Q2NKX9 166 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 ZNF585BQ52M93 769 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 NHSL2Q5HYW2 709 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 OPN5Q6U736 354 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 HSDL2Q6YN16 418 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 LDB1Q86U70 411 aaPredicted RBP6.27□□□□□ -1.41
H3F3A-201ENST00000366813 ZNF321PQ8N8H1 164 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 PRR26Q8N8Z3 221 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 NEXN-AS1Q8NBZ9 246 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 MAGEC3Q8TD91 643 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 PRAP1Q96NZ9 151 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 FAM110AQ9BQ89 295 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 ZNF670Q9BS34 389 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 RHBGQ9H310 441 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 HIF1ANQ9NWT6 349 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 UTP6Q9NYH9 597 aaKnown RBP6.27□□□□□ -1.41
H3F3A-201ENST00000366813 RWDD2AQ9UIY3 292 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 R3HDM2Q9Y2K5 976 aaKnown RBP6.27□□□□□ -1.41
H3F3A-201ENST00000366813 RNF115Q9Y4L5 304 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 CEPT1Q9Y6K0 416 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 RYR2Q92736 4967 aa6.27□□□□□ -1.41
H3F3A-201ENST00000366813 TIPRLO75663 272 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 LY6HO94772 140 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 IPO7O95373 1038 aaKnown RBP6.26□□□□□ -1.41
H3F3A-201ENST00000366813 HPNP05981 417 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 SLC6A12P48065 614 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 CDK9P50750 372 aaKnown RBP6.26□□□□□ -1.41
H3F3A-201ENST00000366813 F2RL1P55085 397 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 NAP1L1P55209 391 aaKnown RBP6.26□□□□□ -1.41
H3F3A-201ENST00000366813 HILS1P60008 231 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 EEF1A1P68104 462 aaKnown RBP6.26□□□□□ -1.41
H3F3A-201ENST00000366813 MSLNQ13421 630 aaPredicted RBP6.26□□□□□ -1.41
H3F3A-201ENST00000366813 NAE1Q13564 534 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 TOMM20Q15388 145 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 ZNF791Q3KP31 576 aaPredicted RBP6.26□□□□□ -1.41
H3F3A-201ENST00000366813 ZNF672Q499Z4 452 aaPredicted RBP6.26□□□□□ -1.41
H3F3A-201ENST00000366813 DEFB134Q4QY38 66 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 VAX1Q5SQQ9 334 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 C6orf141Q5SZD1 244 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 EEF1A1P5Q5VTE0 462 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 SHFQ7M4L6 423 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 HAPLN4Q86UW8 402 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 KRT222Q8N1A0 295 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 PPFIBP2Q8ND30 876 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 PAQR8Q8TEZ7 354 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 ZNF418Q8TF45 676 aaPredicted RBP6.26□□□□□ -1.41
H3F3A-201ENST00000366813 SKA2Q8WVK7 121 aaPredicted RBP6.26□□□□□ -1.41
H3F3A-201ENST00000366813 ASZ1Q8WWH4 475 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 OIT3Q8WWZ8 545 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 SMPDL3AQ92484 453 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 TIGD1Q96MW7 591 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 SF3B5Q9BWJ5 86 aaKnown RBP6.26□□□□□ -1.41
H3F3A-201ENST00000366813 C1QTNF5Q9BXJ0 243 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 CACNG6Q9BXT2 260 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 AIPL1Q9NZN9 384 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 CLCF1Q9UBD9 225 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 FBXO9Q9UK97 447 aaPredicted RBP6.26□□□□□ -1.41
H3F3A-201ENST00000366813 HYDINQ4G0P3 5121 aa6.26□□□□□ -1.41
H3F3A-201ENST00000366813 KCNE1BA0A087WTH5 132 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 IGHV4-61A0A0C4DH41 118 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 OR51F1A6NGY5 319 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 SMAD9O15198 467 aaKnown RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 PIN1P1O15428 100 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 KIF5CO60282 957 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 GALR3O60755 368 aaPredicted RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 CGAP01215 116 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 APOA4P06727 396 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms