RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 AGR2O95994 175 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 MT-CO2P00403 227 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 SLC6A6P31641 620 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 DCTP40126 519 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 CSNK2A1P68400 391 aaPredicted RBP10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 NKX3-2P78367 333 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 SQSTM1Q13501 440 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 ZNF362Q5T0B9 420 aaPredicted RBP10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 CSNK2A3Q8NEV1 391 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 SLC25A51Q9H1U9 297 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 FKRPQ9H9S5 495 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 SPACA1Q9HBV2 294 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 WNK3Q9BYP7 1800 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 SEC14L5O43304 696 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 HOXC6P09630 235 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 CD9P21926 228 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 THBS2P35442 1172 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 TMEM41BQ5BJD5 291 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 C2CD4AQ8NCU7 369 aaPredicted RBP10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 WFIKKN2Q8TEU8 576 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 CNIH4Q9P003 139 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 COL6A6A6NMZ7 2263 aa10.44□□□□□ -0.74
CDC42BPA-205ENST00000366769 RTCAO00442 366 aaKnown RBP10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 MEIS2O14770 477 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 RGS11O94810 467 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 GABARAPO95166 117 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 KNG1P01042 644 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 DUSP7Q16829 419 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 OR2B11Q5JQS5 317 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 SLC27A4Q6P1M0 643 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 PDZD3Q86UT5 571 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 TSPAN11A1L157 253 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 ARL16Q0P5N6 197 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 CCDC116Q8IYX3 515 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 OR5H2Q8NGV7 314 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 GPR78Q96P69 363 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 TGM7Q96PF1 710 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 NSUN3Q9H649 340 aaKnown RBP10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 SOBPA7XYQ1 873 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 K7ERQ8 282 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 ZNF26P17031 533 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 OAZ1P54368 228 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 WNT4P56705 351 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 ZNF678Q5SXM1 525 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 SYNPRQ8TBG9 265 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 APOBEC3GQ9HC16 384 aaKnown RBP10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 EMCNQ9ULC0 261 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 RDH16O75452 317 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 APEHP13798 732 aaKnown RBP10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 CLCNKBP51801 687 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 ABHD18Q0P651 414 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 SLC9A3R2Q15599 337 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 LRIF1Q5T3J3 769 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 PQLC3Q8N755 202 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 ZNF439Q8NDP4 499 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 TPPP3Q9BW30 176 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 ERVH48-1M5A8F1 160 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 RAD52P43351 418 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 SUSD1Q6UWL2 747 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 LRRC28Q86X40 367 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 ADGRF3Q8IZF5 1079 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 CELF5Q8N6W0 485 aaKnown RBP10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 SLC22A18Q96BI1 424 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 B4GALT7Q9UBV7 327 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 EMX2Q04743 252 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 GPR142Q7Z601 462 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 WDR20Q8TBZ3 569 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 DUS3LQ96G46 650 aaKnown RBP10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 ACOT7O00154 380 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 SEC61A1P61619 476 aaKnown RBP10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 SLAMF1Q13291 335 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 DHCR24Q15392 516 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 C18orf21Q32NC0 220 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 FUT10Q6P4F1 479 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 B3GLCTQ6Y288 498 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 INTS14Q96SY0 518 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 RAB11FIP5Q9BXF6 653 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 KCNH6Q9H252 994 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 SLC22A14Q9Y267 594 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 OR5H15A6NDH6 313 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 OR5H14A6NHG9 310 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 OR5H1A6NKK0 313 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 LRRTM2O43300 516 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 C8AP07357 584 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 OMGP23515 440 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 DPY19L1Q2PZI1 675 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 ZNF600Q6ZNG1 722 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 C1orf52Q8N6N3 182 aaKnown RBP10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 FAM213BQ8TBF2 198 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 RSPRY1Q96DX4 576 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 PIGMQ9H3S5 423 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 NFAT5O94916 1531 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 RPE65Q16518 533 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 SYPL2Q5VXT5 272 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 CD276Q5ZPR3 534 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 LRRTM1Q86UE6 522 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 GPR137CQ8N3F9 429 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 NIPA2Q8N8Q9 360 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 OR51D1Q8NGF3 324 aa10.43□□□□□ -0.74
CDC42BPA-205ENST00000366769 TRAV18A0A075B6X5 111 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms