RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 B4GALT2O60909 372 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 PRKRAO75569 313 aaKnown RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 ATP6AP2O75787 350 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 CDC123O75794 336 aaPredicted RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 NEURL1O76050 574 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 CBX6O95503 412 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 DDAH2O95865 285 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 WDPCPO95876 746 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 KLK1P06870 262 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 MAOAP21397 527 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 TIA1P31483 386 aaKnown RBP eCLIP7.12□□□□□ -1.27
YBX3-204ENST00000366290 SSR2P43308 183 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 UQCRFS1P47985 274 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 CPA2P48052 419 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 GPR143P51810 404 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 RAP1GDS1P52306 607 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 RAB38P57729 211 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 OR4D2P58180 307 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 SLC26A5P58743 744 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 BTG2P78543 158 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 SLAMF1Q13291 335 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 RFTN2Q52LD8 501 aaPredicted RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 PRR30Q53SZ7 412 aaPredicted RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 ACER2Q5QJU3 275 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 C6orf136Q5SQH8 315 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 MFSD4BQ5TF39 518 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 ZNF324BQ6AW86 544 aaPredicted RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 CGB2Q6NT52 195 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 PAPD4Q6PIY7 484 aaKnown RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 LINC00696Q6ZRV3 163 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 C1orf122Q6ZSJ8 110 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 NUDT13Q86X67 352 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 DDIASQ8IXT1 998 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 MMP21Q8N119 569 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 GHDCQ8N2G8 530 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 C7orf57Q8NEG2 295 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 NFAM1Q8NET5 270 aaPredicted RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 WIPF2Q8TF74 440 aaPredicted RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 TM4SF18Q96CE8 201 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 PPP1R36Q96LQ0 422 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 ZNF317Q96PQ6 595 aaPredicted RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 NPAS2Q99743 824 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 SLX1AQ9BQ83 275 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 QTRT1Q9BXR0 403 aaKnown RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 NUF2Q9BZD4 464 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 TRIM45Q9H8W5 580 aaPredicted RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 MEAF6Q9HAF1 191 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 LRTM1Q9HBL6 345 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 C1orf109Q9NX04 203 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 TEX10Q9NXF1 929 aaPredicted RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 PPP1R14DQ9NXH3 145 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 STMN3Q9NZ72 180 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 PTGFRNQ9P2B2 879 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 UTS2RQ9UKP6 389 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 DLGAP4Q9Y2H0 992 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 NTNG1Q9Y2I2 539 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 ATG4BQ9Y4P1 393 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 GTF3C1Q12789 2109 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 OR5H15A6NDH6 313 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 WASHC1A8K0Z3 465 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 RHODO00212 210 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 CLDN4O14493 209 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 RGS14O43566 566 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 PCDH7O60245 1069 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 CTNSO60931 367 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 AIFM1O95831 613 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 FAM58BPP0C7Q3 252 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 RPL38P63173 70 aaKnown RBP7.11□□□□□ -1.27
YBX3-204ENST00000366290 ARG2P78540 354 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 IGLV3-21P80748 117 aaPredicted RBP7.11□□□□□ -1.27
YBX3-204ENST00000366290 TNFRSF17Q02223 184 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 ACTN3Q08043 901 aaPredicted RBP7.11□□□□□ -1.27
YBX3-204ENST00000366290 ACSM2AQ08AH3 577 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 MEP1AQ16819 746 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 IMPG1Q17R60 797 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 SLC9B1Q4ZJI4 515 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 SPIN4Q56A73 249 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 TMEM268Q5VZI3 342 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 ACSM2BQ68CK6 577 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 C18orf63Q68DL7 685 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 NOXRED1Q6NXP6 359 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 EPGNQ6UW88 154 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 CRLF3Q8IUI8 442 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 KIRREL3Q8IZU9 778 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 SLC5A8Q8N695 610 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 APCDD1LQ8NCL9 501 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 CATSPER1Q8NEC5 780 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 B3GNT7Q8NFL0 401 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 NFKBIDQ8NI38 313 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 C16orf78Q8WTQ4 265 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 FAR1Q8WVX9 515 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 DDB2Q92466 427 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 METTL2AQ96IZ6 378 aaKnown RBP7.11□□□□□ -1.27
YBX3-204ENST00000366290 ZNF354BQ96LW1 612 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 OR52B2Q96RD2 323 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 CCT7Q99832 543 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 CENPKQ9BS16 269 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 EBPLQ9BY08 206 aa7.11□□□□□ -1.27
YBX3-204ENST00000366290 WDR55Q9H6Y2 383 aaPredicted RBP7.11□□□□□ -1.27
YBX3-204ENST00000366290 COPS7BQ9H9Q2 264 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms