RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ACER3Q9NUN7 267 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 KLHL13Q9P2N7 655 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 GPR52Q9Y2T5 361 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 HMGN4O00479 90 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ADAM11O75078 769 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PRKD3O94806 890 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 H6PDO95479 791 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CSTAP01040 98 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PGRP06401 933 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 YES1P07947 543 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ENPP1P22413 925 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 EPHA3P29320 983 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 S100A3P33764 101 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CDKN2CP42773 168 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SESN3P58005 492 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PPP2R2AP63151 447 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ACKR1Q16570 336 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TIGD2Q4W5G0 525 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 BEND6Q5SZJ8 279 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 HHATQ5VTY9 493 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 C16orf62Q7Z3J2 963 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 LRRC75A-AS1Q8N1F1 130 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SLC43A2Q8N370 569 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ANKRD42Q8N9B4 389 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 RFWD2Q8NHY2 731 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ZNF75CPQ92670 426 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ZC3HAV1LQ96H79 300 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PAIP2Q9BPZ3 127 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PSD2Q9BQI7 771 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SLC35A5Q9BS91 424 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TMEM204Q9BSN7 226 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CCDC106Q9BWC9 280 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 WDR55Q9H6Y2 383 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 C12orf49Q9H741 205 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 MARCOQ9UEW3 520 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 WDR45Q9Y484 360 aa12.16□□□□□ -0.46
TNFRSF1A-202ENST00000366159 A0A1W2PNR3 127 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ZNF814B7Z6K7 855 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SMAD9O15198 467 aaKnown RBP12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 UBTFL6P0CB48 400 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PGCP20142 388 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 KHKP50053 298 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 NME5P56597 212 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TXNL4AP83876 142 aaKnown RBP12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CHRNEQ04844 493 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 MAPK11Q15759 364 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ATAD3BQ5T9A4 648 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 C3orf33Q6P1S2 294 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PLEKHM3Q6ZWE6 761 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 MAVSQ7Z434 540 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ZNF619Q8N2I2 560 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TMCO5AQ8N6Q1 288 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ATP6V1C2Q8NEY4 427 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 REXO5Q96IC2 774 aaKnown RBP12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 INPP5KQ9BT40 448 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 QRSL1Q9H0R6 528 aaKnown RBP12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SLC38A1Q9H2H9 487 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TMBIM4Q9HC24 238 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 EXOSC3Q9NQT5 275 aaKnown RBP12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SLC35A3Q9Y2D2 325 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 FREM1Q5H8C1 2179 aa12.15□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PRR14LQ5THK1 2151 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GOLGA8QA0A0J9YX86 632 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GOLGA8OA6NCC3 632 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CCDC154A6NI56 674 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CLDN24A6NM45 220 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TRPC5OSA6NMA1 111 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 C9JVG2 144 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GOLGA8NF8WBI6 632 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SLCO1B7G3V0H7 640 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 KLF11O14901 512 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CYTIPO60759 359 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 FPR1P21462 350 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 APOBEC1P41238 236 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CCR4P51679 360 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MVDP53602 400 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MAGOHP61326 146 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 NKX6-1P78426 367 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 KCNJ10P78508 379 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 LRRC74AQ0VAA2 488 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SYPL1Q16563 259 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 BEX5Q5H9J7 111 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TMEM201Q5SNT2 666 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SFRP5Q5T4F7 317 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TMPPEQ6ZT21 453 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 STK32CQ86UX6 486 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 RNF130Q86XS8 419 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GLB1L3Q8NCI6 653 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TMEM234Q8WY98 164 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PIGTQ969N2 578 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TRNT1Q96Q11 434 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 OR52E6Q96RD3 313 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PANX1Q96RD7 426 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TACO1Q9BSH4 297 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 HDHD5Q9BXW7 423 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 FANCFQ9NPI8 374 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SLC6A13Q9NSD5 602 aa12.14□□□□□ -0.47
TNFRSF1A-202ENST00000366159 IGHV3-15A0A0B4J1V0 119 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms