RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CDK9P50750 372 aaKnown RBP4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 RAB10P61026 200 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 LTBQ06643 244 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 TBL3Q12788 808 aaKnown RBP4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 RPS6KA2Q15349 733 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 ZKSCAN8Q15776 578 aaPredicted RBP4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 NNATQ16517 81 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 DEFB113Q30KQ7 82 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 FBXL19-AS1Q494R0 122 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 EIPR1Q53HC9 387 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 NSUN5P2Q63ZY6 315 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 CYP20A1Q6UW02 462 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 PLXDC2Q6UX71 529 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 RAPH1Q70E73 1250 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 MAATS1Q7Z4T9 603 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 CAMKMTQ7Z624 323 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 ISCA2Q86U28 154 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 YRDCQ86U90 279 aaKnown RBP4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 LACC1Q8IV20 430 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 DND1Q8IYX4 353 aaKnown RBP4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 TAGAPQ8N103 731 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 ZCCHC7Q8N3Z6 543 aaKnown RBP4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 STAG3L4Q8TBR4 150 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 SPPL2AQ8TCT8 520 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 KCTD4Q8WVF5 259 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 CDKL2Q92772 493 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 SLC25A28Q96A46 364 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 NXNL1Q96CM4 212 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 UBXN10Q96LJ8 280 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 ATOH8Q96SQ7 321 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 PELOQ9BRX2 385 aaKnown RBP4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 CENPKQ9BS16 269 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 TMEM120AQ9BXJ8 343 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 ZNF717Q9BY31 904 aaPredicted RBP4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 UGT2B28Q9BY64 529 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 CCDC134Q9H6E4 229 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 ACTR8Q9H981 624 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 ZNF629Q9UEG4 869 aaPredicted RBP4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 LRCH1Q9Y2L9 728 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 C15orf41Q9Y2V0 281 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 ASB4Q9Y574 426 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 ANGPTL3Q9Y5C1 460 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 PCDHGB3Q9Y5G1 929 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 ACANP16112 2415 aa4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 NIPBLQ6KC79 2804 aaeCLIP4.68□□□□□ -1.66
RNU4-4P-201ENST00000364588 MED12LQ86YW9 2145 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 VPS13CQ709C8 3753 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 A0A0A6YYD5 115 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 A0A1W2PPR1 153 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 MBD3L5A6NJ08 208 aaPredicted RBP4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 FAM159BA6NKW6 160 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 OR6C76A6NM76 312 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 CCDC188H7C350 402 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 ZSCAN12O43309 604 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 KERAO60938 352 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 NDUFB8O95169 186 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 SNX4O95219 450 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 SIX3O95343 332 aaPredicted RBP4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 HPNP05981 417 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 SLC35E2P0CK97 266 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 GFAPP14136 432 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 NT5EP21589 574 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 PIK3R1P27986 724 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 SPRP35270 261 aaPredicted RBP4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 BSGP35613 385 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 ARL1P40616 181 aaPredicted RBP4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 CASP3P42574 277 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 PAFAH1B1P43034 410 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 SLCO1A2P46721 670 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 TMED10P49755 219 aaKnown RBP4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 NAGLUP54802 743 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 GPX6P59796 221 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 GNG11P61952 73 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 DCAF7P61962 342 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 PHEXP78562 749 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 SRYQ05066 204 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 SF3A3Q12874 501 aaKnown RBP eCLIP4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 ILF2Q12905 390 aaKnown RBP4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 CALCOCO2Q13137 446 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 BIKQ13323 160 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 RCAN2Q14206 197 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 PFKFB4Q16877 469 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 KBTBD12Q3ZCT8 623 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 GRTP1Q5TC63 336 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 LIPJQ5W064 366 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 OR52E8Q6IFG1 317 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 ANGPTL8Q6UXH0 198 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 C3orf62Q6ZUJ4 267 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 GOLGA7Q7Z5G4 137 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 LUZP2Q86TE4 346 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 TBC1D1Q86TI0 1168 aaPredicted RBP4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 BIVMQ86UB2 503 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 CCDC25Q86WR0 208 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 PM20D2Q8IYS1 436 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 GCNT2Q8N0V5 402 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 ZNF615Q8N8J6 731 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 ZNF441Q8N8Z8 693 aa4.67□□□□□ -1.66
RNU4-4P-201ENST00000364588 C7orf57Q8NEG2 295 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms