RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 UBL3O95164 117 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 PTBP1P26599 531 aaKnown RBP eCLIP11.82□□□□□ -0.52
VAMP1-201ENST00000361716 MTNR1BP49286 362 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 CLDN2P57739 230 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 C17orf64Q86WR6 236 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 ZSCAN1Q8NBB4 408 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 PINK1Q9BXM7 581 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 PURGQ9UJV8 347 aaKnown RBP11.82□□□□□ -0.52
VAMP1-201ENST00000361716 K7ESM1 405 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 POP7O75817 140 aaKnown RBP11.81□□□□□ -0.52
VAMP1-201ENST00000361716 EIF3GO75821 320 aaKnown RBP eCLIP11.81□□□□□ -0.52
VAMP1-201ENST00000361716 AKR7A3O95154 331 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 C1GALT1C1LP0DN25 315 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 WASP42768 502 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 GGTA1PQ4G0N0 100 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 EOGTQ5NDL2 527 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 PLEKHS1Q5SXH7 462 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 SEZ6L2Q6UXD5 910 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 OR5AR1Q8NGP9 310 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 GHSRQ92847 366 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 SLC35G5Q96KT7 338 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 NDC1Q9BTX1 674 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 HINT3Q9NQE9 182 aaKnown RBP11.81□□□□□ -0.52
VAMP1-201ENST00000361716 AHSPQ9NZD4 102 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 A4GNTQ9UNA3 340 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 BACE2Q9Y5Z0 518 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 WNT6Q9Y6F9 365 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 OR6C68A6NDL8 312 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 G3V3Q6 166 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 CDC123O75794 336 aaPredicted RBP11.81□□□□□ -0.52
VAMP1-201ENST00000361716 HMGN1P05114 100 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 ZDHHC11BP0C7U3 371 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 UQCRC2P22695 453 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 ANXA11P50995 505 aaKnown RBP11.81□□□□□ -0.52
VAMP1-201ENST00000361716 ODF4Q2M2E3 257 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.81□□□□□ -0.52
VAMP1-201ENST00000361716 FCRLAQ7L513 359 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 NPAS4Q8IUM7 802 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 CDH26Q8IXH8 852 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 PIGXQ8TBF5 258 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 SFT2D1Q8WV19 159 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 SEC22AQ96IW7 307 aa11.81□□□□□ -0.52
VAMP1-201ENST00000361716 POM121BA6NF01 834 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 A8MVJ9 347 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 F5H5P2 479 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 SOCS5O75159 536 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 LY86O95711 162 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 RPL3P39023 403 aaKnown RBP11.8□□□□□ -0.52
VAMP1-201ENST00000361716 RGS8P57771 180 aaPredicted RBP11.8□□□□□ -0.52
VAMP1-201ENST00000361716 PRR5P85299 388 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 C2orf68Q2NKX9 166 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 UNQ6126/PRO20091Q6UXV3 157 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 GNPDA2Q8TDQ7 276 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 KCTD12Q96CX2 325 aaKnown RBP11.8□□□□□ -0.52
VAMP1-201ENST00000361716 ELP4Q96EB1 424 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 C10orf90Q96M02 699 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 ZNF75AQ96N20 296 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 CASD1Q96PB1 797 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 CCDC86Q9H6F5 360 aaKnown RBP11.8□□□□□ -0.52
VAMP1-201ENST00000361716 FGF20Q9NP95 211 aaPredicted RBP11.8□□□□□ -0.52
VAMP1-201ENST00000361716 DMRT3Q9NQL9 472 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 HCFC1R1Q9NWW0 138 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 Q9Y3F1 56 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 DNAH14Q0VDD8 3507 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 PSMB10P40306 273 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 NAA10P41227 235 aaPredicted RBP11.8□□□□□ -0.52
VAMP1-201ENST00000361716 PTH2RP49190 550 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 PCBP3P57721 371 aaKnown RBP11.8□□□□□ -0.52
VAMP1-201ENST00000361716 ST8SIA6P61647 398 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 ID2Q02363 134 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 SP140Q13342 867 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 PRAMEF14Q5SWL7 426 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 SLCO4C1Q6ZQN7 724 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 ZNF546Q86UE3 836 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 CMTM4Q8IZR5 234 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 PUSL1Q8N0Z8 303 aaKnown RBP11.8□□□□□ -0.52
VAMP1-201ENST00000361716 OR5T2Q8NGG2 359 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 PAQR8Q8TEZ7 354 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 DUSP19Q8WTR2 217 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 FCAMRQ8WWV6 532 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 DNAJA3Q96EY1 480 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 WBP1Q96G27 269 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 METTL21EPA6NDL7 271 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 KRT33AO76009 404 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 PCSK2P16519 638 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 NPPBP16860 134 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 IFNGR2P38484 337 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 KCNJ5P48544 419 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 METAP1P53582 386 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 PDZK1IP1Q13113 114 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 C9orf152Q5JTZ5 239 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 MANEAQ5SRI9 462 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 TMEM69Q5SWH9 247 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 DCAF12L2Q5VW00 463 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 ZNF660Q6AZW8 331 aaPredicted RBP11.8□□□□□ -0.52
VAMP1-201ENST00000361716 ZNF783Q6ZMS7 281 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 OR4Q3Q8NH05 313 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 GLYATL1Q969I3 302 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 C16orf58Q96GQ5 468 aa11.8□□□□□ -0.52
VAMP1-201ENST00000361716 PEX11GQ96HA9 241 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms