RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 HNRNPKP61978 463 aaKnown RBP eCLIP20.85■□□□□ 0.93
LDB1-201ENST00000361198 NNATQ16517 81 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 COL13A1Q5TAT6 717 aaPredicted RBP20.85■□□□□ 0.93
LDB1-201ENST00000361198 LHFPL3Q86UP9 236 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 GATAD2AQ86YP4 633 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 MMP28Q9H239 520 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 TMEM27Q9HBJ8 222 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 PDE7BQ9NP56 450 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 MEPEQ9NQ76 525 aaPredicted RBP20.85■□□□□ 0.93
LDB1-201ENST00000361198 FLRT3Q9NZU0 649 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 CBLCQ9ULV8 474 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 LINC00854A0A1B0GVQ3 168 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 TLCD2A6NGC4 264 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 FAM183AA6NL82 134 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 PLA2G10O15496 165 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 RFPL3O75679 317 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 HLA-DQB1P01920 261 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 HMGN1P05114 100 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 TBXA2RP21731 343 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 PGDP52209 483 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 NXPH1P58417 271 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 PPP3R1P63098 170 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 DSG2Q14126 1118 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.84■□□□□ 0.938e-12■□□□□ 10
LDB1-201ENST00000361198 AMZ1Q400G9 498 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 ZFP69Q49AA0 526 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 GARNL3Q5VVW2 1013 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 ZNF613Q6PF04 617 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 CPOQ8IVL8 374 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 OR51Q1Q8NH59 317 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 C1orf216Q8TAB5 229 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 BPIFA2Q96DR5 249 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 HS6ST2Q96MM7 605 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 ZNF559Q9BR84 538 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 DNAJB12Q9NXW2 375 aaKnown RBP20.84■□□□□ 0.93
LDB1-201ENST00000361198 FBXL21Q9UKT6 434 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 ERVK-19Q9WJR5 959 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 CEP192Q8TEP8 1941 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 A0A0B4J2E0 115 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 A0A1B0GX12 115 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 CCDC182A6NF36 153 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 B4DXG7 233 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 IGHA1P01876 353 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 ACAA2P42765 397 aaKnown RBP20.84■□□□□ 0.93
LDB1-201ENST00000361198 CSNK1EP49674 416 aaKnown RBP20.84■□□□□ 0.93
LDB1-201ENST00000361198 OGFOD3Q6PK18 319 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 GRAMD2AQ8IUY3 354 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 CAMKK1Q8N5S9 505 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 PPP1R3EQ9H7J1 279 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 C14orf105Q9NVL8 296 aa20.84■□□□□ 0.93
LDB1-201ENST00000361198 BLACEA4D250 179 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 BHLHE40O14503 412 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 SOCS6O14544 535 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 TFECO14948 347 aaPredicted RBP20.83■□□□□ 0.93
LDB1-201ENST00000361198 KCNAB1Q14722 419 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 TBRG1Q3YBR2 411 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 TMPRSS11FQ6ZWK6 438 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 C16orf52Q8NHV5 167 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 ADAMTS18Q8TE60 1221 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 DEPDC7Q96QD5 511 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 JAM3Q9BX67 310 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 PCED1AQ9H1Q7 454 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 MED31Q9Y3C7 131 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 CABIN1Q9Y6J0 2220 aa20.83■□□□□ 0.93
LDB1-201ENST00000361198 A0A1B0GWA3 101 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 CENPXA8MT69 81 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 PRAMEF2O60811 474 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 HLA-DPB1P04440 258 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 CT45A8P0DMV1 189 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 CT45A9P0DMV2 189 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 BMP7P18075 431 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 HTR1FP30939 366 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 DAB2P98082 770 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 C14orf28Q4W4Y0 310 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 PYDC2Q56P42 97 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 CT45A2Q5DJT8 189 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 SMARCD3Q6STE5 483 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 METAP1DQ6UB28 335 aaPredicted RBP20.83■□□□□ 0.92
LDB1-201ENST00000361198 THSD4Q6ZMP0 1018 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 ZFP41Q8N8Y5 198 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 OR52L1Q8NGH7 329 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 OR52N1Q8NH53 320 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 OTULINQ96BN8 352 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 MARCH7Q9H992 704 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 DDX28Q9NUL7 540 aaKnown RBP20.83■□□□□ 0.92
LDB1-201ENST00000361198 MAU2Q9Y6X3 613 aa20.83■□□□□ 0.92
LDB1-201ENST00000361198 SYNDIG1LA6NDD5 238 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 CASKO14936 926 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 CHP2O43745 196 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 AKAP8O43823 692 aaKnown RBP20.82■□□□□ 0.92
LDB1-201ENST00000361198 HCN1O60741 890 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 GUSBP08236 651 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 STARD6P59095 220 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 TCTE1Q5JU00 501 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 CDK20Q8IZL9 346 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 ATP6V1C2Q8NEY4 427 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 OR13C2Q8NGS9 318 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 SLC7A6Q92536 515 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 OR10A5Q9H207 317 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 SYNDIG1Q9H7V2 258 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms