RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 HLA-DMAP28067 261 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 OR2T11Q8NH01 316 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 PRR11Q96HE9 360 aaPredicted RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF582Q96NG8 517 aaPredicted RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 STYXL1Q9Y6J8 313 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 TYRP1P17643 537 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 GSK3AP49840 483 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 DEFB118Q96PH6 123 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 SLC35A3Q9Y2D2 325 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 RPS27LQ71UM5 84 aaKnown RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 TBPP20226 339 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF133P52736 654 aaPredicted RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 MEF2AQ02078 507 aaPredicted RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 OR1M1Q8NGA1 313 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 OR52N2Q8NGI0 321 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 OR4A16Q8NH70 328 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 L3HYPDHQ96EM0 354 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 REEP6Q96HR9 211 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 MYEF2Q9P2K5 600 aaKnown RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 SLC7A7Q9UM01 511 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 EBPQ15125 230 aaKnown RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 MEP1BQ16820 701 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ACSM3Q53FZ2 586 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 KDM1BQ8NB78 822 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 OR4C5Q8NGB2 326 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 PDCD1LG2Q9BQ51 273 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 FAM198AQ9UFP1 575 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM98Q9Y2Y6 226 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 PXDNQ92626 1479 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 OR2C1O95371 312 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 SERPINA2P20848 420 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 TPMTP51580 245 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 RPS26P62854 115 aaKnown RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 H3F3AP84243 136 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 FAM122BQ7Z309 247 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 KLHDC7BQ96G42 594 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 PPP1R3DO95685 299 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 SELPLGQ14242 412 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 PLXDC1Q8IUK5 500 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 OR14L1PQ8NHC6 308 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 THAP3Q8WTV1 239 aaPredicted RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 OR5B2Q96R09 309 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 NIT2Q9NQR4 276 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 MST1RQ04912 1400 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 LOC105369274A0A096LPK9 316 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 LRIT2A6NDA9 550 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 MEIS3P1A6NDR6 274 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 SDHDO14521 159 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 OR4N4Q8N0Y3 316 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 CPNE4Q96A23 557 aaPredicted RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 HRASLSQ9HDD0 168 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 SLC31A2O15432 143 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 RAB5AP20339 215 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 SUMO1P63165 101 aaKnown RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 GALNT1Q10472 559 aaPredicted RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 BTNL8Q6UX41 500 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 FAM160A2Q8N612 972 aaPredicted RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 DMBX1Q8NFW5 382 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 NTPCRQ9BSD7 190 aaKnown RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 CHRDQ9H2X0 955 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 FBRSL1Q9HCM7 1045 aaKnown RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 HIDE1A8MVS5 230 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 INTS12Q96CB8 462 aaKnown RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 DPH2Q9BQC3 489 aaPredicted RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 F5H5K5 113 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 TRAPPC2LH3BP13 241 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 GSRP00390 522 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 CDK4P11802 303 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 CPN1P15169 458 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 SLC10A6Q3KNW5 377 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 GDF6Q6KF10 455 aaPredicted RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 OR1S2Q8NGQ3 325 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 CORO2AQ92828 525 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 SLCO5A1Q9H2Y9 848 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF337Q9Y3M9 751 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 GPR25O00155 361 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 KCNK5O95279 499 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 SLC2A13Q96QE2 648 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF395Q9H8N7 513 aaPredicted RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF860A6NHJ4 632 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF891A8MT65 544 aaPredicted RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 ATP1B3P54709 279 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 DIO2Q92813 273 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF251Q9BRH9 671 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 METTL17Q9H7H0 456 aaPredicted RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 EMC7Q9NPA0 242 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 HHLA2Q9UM44 414 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 RGPD8O14715 1765 aaPredicted RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 A0A1W2PQ09 198 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 CLEC3BP05452 202 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 THBS1P07996 1170 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 F2RP25116 425 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 ALKAL2Q6UX46 152 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 RANBP9Q96S59 729 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 SGIP1Q9BQI5 828 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 KCNK6Q9Y257 313 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 ETV7Q9Y603 341 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 BCL9O00512 1426 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 SHEQ5VZ18 495 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 AMDHD1Q96NU7 426 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms