RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 LRRN3E7EW58 273 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 MAGEB4O15481 346 aaPredicted RBP10.36□□□□□ -0.75
SSU72-202ENST00000359060 POU2F2P09086 479 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 CPEP16870 476 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 GABRG2P18507 467 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 FUT5Q11128 374 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 DUSP8Q13202 625 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 KIAA0895LQ68EN5 471 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 CLDN22Q8N7P3 220 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 ZNF248Q8NDW4 579 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 OR4N2Q8NGD1 307 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 ITFG2Q969R8 447 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 KATNB1Q9BVA0 655 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 LRRN3Q9H3W5 708 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 MAN2C1Q9NTJ4 1040 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 GRIP1Q9Y3R0 1128 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 OR5K3A6NET4 321 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 CDC42EP2O14613 210 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 SURF4O15260 269 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 SCO2O43819 266 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 SSX4O60224 188 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 OR12D2P58182 307 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 IRF3Q14653 427 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 BAK1Q16611 211 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 ZNF658BQ4V348 819 aaPredicted RBP10.36□□□□□ -0.75
SSU72-202ENST00000359060 ACSM3Q53FZ2 586 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 RPTNQ6XPR3 784 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 SHISA6Q6ZSJ9 500 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 TOMM5Q8N4H5 51 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 ADOQ96SZ5 270 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 CNN2Q99439 309 aaKnown RBP10.36□□□□□ -0.75
SSU72-202ENST00000359060 ARHGDIGQ99819 225 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 TAPBPLQ9BX59 468 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 FN3KQ9H479 309 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 FOLH1BQ9HBA9 442 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 LYRM4Q9HD34 91 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 C20orf141Q9NUB4 165 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 MED17Q9NVC6 651 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 PAQR5Q9NXK6 330 aaPredicted RBP10.36□□□□□ -0.75
SSU72-202ENST00000359060 QPCTLQ9NXS2 382 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 EPOPA6NHQ4 379 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 CD79BP40259 229 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 OMPP47874 163 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 CTBP2P56545 445 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 ACTC1P68032 377 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 ACTA1P68133 377 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 BTG2P78543 158 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 LEG1Q6P5S2 330 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 ZNF322Q6U7Q0 402 aaPredicted RBP10.36□□□□□ -0.75
SSU72-202ENST00000359060 SLC7A5P1Q8MH63 180 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 OR6N2Q8NGY6 317 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 TSEN15Q8WW01 171 aaKnown RBP10.36□□□□□ -0.75
SSU72-202ENST00000359060 RFT1Q96AA3 541 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 C5orf34Q96MH7 638 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 ZNF681Q96N22 645 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 AICDAQ9GZX7 198 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 CENPVL1A0A0U1RR11 272 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 CPED1A4D0V7 1026 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 SLC35E2P0CK97 266 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 LIMS3P0CW19 117 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 LIMS4P0CW20 117 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 CLUP10909 449 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 MAKP20794 623 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 HCCSP53701 268 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 CTXN1P60606 82 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 TMEM201Q5SNT2 666 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 ULK3Q6PHR2 472 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 RNF113BQ8IZP6 322 aaKnown RBP10.36□□□□□ -0.75
SSU72-202ENST00000359060 C1orf216Q8TAB5 229 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 C11orf54Q9H0W9 315 aaPredicted RBP10.36□□□□□ -0.75
SSU72-202ENST00000359060 ISG20L2Q9H9L3 353 aaKnown RBP10.36□□□□□ -0.75
SSU72-202ENST00000359060 GRHPRQ9UBQ7 328 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 MMP17Q9ULZ9 603 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 SPATA2Q9UM82 520 aa10.36□□□□□ -0.75
SSU72-202ENST00000359060 AK6Q9Y3D8 172 aaKnown RBP10.36□□□□□ -0.75
SSU72-202ENST00000359060 LYRM1O43325 122 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 KCNK2O95069 426 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 RAB3BP20337 219 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 FRKP42685 505 aaPredicted RBP10.35□□□□□ -0.75
SSU72-202ENST00000359060 CAPZA2P47755 286 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 CCDC190Q86UF4 302 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 ATCAYQ86WG3 371 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 RNF121Q9H920 327 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 CES1P1Q9UKY3 287 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 CBLCQ9ULV8 474 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 RNF13O43567 381 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 PPM1BO75688 479 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 RENP00797 406 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 CHRNB1P11230 501 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 ATP12AP54707 1039 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 NSDHLQ15738 373 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 FCRL6Q6DN72 434 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 TMEM53Q6P2H8 277 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 COMMD2Q86X83 199 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 TMEM151BQ8IW70 566 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 CA13Q8N1Q1 262 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 OR2L13Q8N349 312 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 ARL14Q8N4G2 192 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 SETD6Q8TBK2 473 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 TRMT10AQ8TBZ6 339 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms