RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 APH1AQ96BI3 265 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 ROPN1LQ96C74 230 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 SLC38A1Q9H2H9 487 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 B4GALT6Q9UBX8 382 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 PRAMEF2O60811 474 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 PIGRP01833 764 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 ZNF30P17039 623 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 SOX18P35713 384 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 SLC18A1P54219 525 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 RRADP55042 308 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 FAM74A1Q5RGS3 127 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 SECTM1Q8WVN6 248 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 OR5P2Q8WZ92 322 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 CPNE4Q96A23 557 aaPredicted RBP9.18□□□□□ -0.94
CHD3-202ENST00000358181 SEC22AQ96IW7 307 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 MBOAT4Q96T53 435 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 PAAF1Q9BRP4 392 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 TMEM175Q9BSA9 504 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 MTG2Q9H4K7 406 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 C5AR2Q9P296 337 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 B3GNT3Q9Y2A9 372 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 MED1Q15648 1581 aaPredicted RBP9.18□□□□□ -0.94
CHD3-202ENST00000358181 MYADML2A6NDP7 307 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 FAM90A27PA6NNH2 459 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 NTSR1P30989 418 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 RHOBP62745 196 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 HOXA4Q00056 320 aaPredicted RBP9.18□□□□□ -0.94
CHD3-202ENST00000358181 TP53I3Q53FA7 332 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 TLDC1Q6P9B6 456 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 TMEM65Q6PI78 240 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 C7orf26Q96N11 449 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 TSGA13Q96PP4 275 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 TUBB1Q9H4B7 451 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 RNF186Q9NXI6 227 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 ASIC5Q9NY37 505 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 CITO14578 2027 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 GABRDO14764 452 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 CA3P07451 260 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 FCGR2AP12318 317 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 DRD5P21918 477 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 P2RY2P41231 377 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 TMEM230Q96A57 120 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 RTP3Q9BQQ7 232 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 OCSTAMPQ9BR26 566 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 CCDC32Q9BV29 185 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 ACTR3BQ9P1U1 418 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 A0A0A6YYC8 382 aaPredicted RBP9.18□□□□□ -0.94
CHD3-202ENST00000358181 I3L1I5 382 aaPredicted RBP9.18□□□□□ -0.94
CHD3-202ENST00000358181 PRRG2O14669 202 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 TPSB2P20231 275 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 TAS2R30P59541 319 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 TPSAB1Q15661 275 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 RNFT1Q5M7Z0 435 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 PODNL1Q6PEZ8 512 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 SEZ6L2Q6UXD5 910 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 Q6ZVL8 140 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 COMMD7Q86VX2 200 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 HS3ST5Q8IZT8 346 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 SDR9C7Q8NEX9 313 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 SMOQ99835 787 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 EBF4Q9BQW3 602 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 MOV10Q9HCE1 1003 aaKnown RBP9.18□□□□□ -0.94
CHD3-202ENST00000358181 SLC7A7Q9UM01 511 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 C9orf172C9J069 976 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ZNF17P17021 662 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 MAOAP21397 527 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 OR8J1Q8NGP2 316 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 HRASLS5Q96KN8 279 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 APMAPQ9HDC9 416 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 LMO7Q8WWI1 1683 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ADGRB2O60241 1585 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 RDH16O75452 317 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ABHD2P08910 425 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 CALCBP10092 127 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 HTR3AP46098 478 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 UBE2G1P62253 170 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 SNRPD2P62316 118 aaKnown RBP9.17□□□□□ -0.94
CHD3-202ENST00000358181 RUNX3Q13761 415 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 GPR33Q49SQ1 333 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 YIF1BQ5BJH7 314 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ZNF684Q5T5D7 378 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 TSPYL5Q86VY4 417 aaPredicted RBP9.17□□□□□ -0.94
CHD3-202ENST00000358181 SULF2Q8IWU5 870 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 FAM109AQ8N4B1 249 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 LINC00469Q8N7U9 141 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 TCEAL2Q9H3H9 227 aaPredicted RBP9.17□□□□□ -0.94
CHD3-202ENST00000358181 REEP4Q9H6H4 257 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 CNTD2Q9H8S5 307 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 OR5K4A6NMS3 321 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 HIDE1A8MVS5 230 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 SLC43A1O75387 559 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 GJB5O95377 273 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ITGAMP11215 1152 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ZNF280AP59817 542 aaPredicted RBP9.17□□□□□ -0.94
CHD3-202ENST00000358181 ZXDBP98169 803 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 REEP3Q6NUK4 255 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 METTL25Q8N6Q8 603 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 BMFQ96LC9 184 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 GPR22Q99680 433 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 NOCTQ9UK39 431 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms