RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 IL11P20809 199 aa23■■□□□ 1.27
SSBP3-202ENST00000357475 SRD5A2P31213 254 aa23■■□□□ 1.27
SSBP3-202ENST00000357475 ZNF41P51814 821 aaPredicted RBP23■■□□□ 1.27
SSBP3-202ENST00000357475 PRR30Q53SZ7 412 aaPredicted RBP23■■□□□ 1.27
SSBP3-202ENST00000357475 WIPI1Q5MNZ9 446 aaPredicted RBP23■■□□□ 1.27
SSBP3-202ENST00000357475 PLEKHM3Q6ZWE6 761 aa23■■□□□ 1.27
SSBP3-202ENST00000357475 SLC22A16Q86VW1 577 aa23■■□□□ 1.27
SSBP3-202ENST00000357475 LSMEM1Q8N8F7 131 aa23■■□□□ 1.27
SSBP3-202ENST00000357475 PAPD5Q8NDF8 572 aaKnown RBP23■■□□□ 1.27
SSBP3-202ENST00000357475 ZNF407Q9C0G0 2248 aa23■■□□□ 1.27
SSBP3-202ENST00000357475 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 H3BNX3 289 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 ZNF24P17028 368 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 SLC7A1P30825 629 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 B3GALT5-AS1P59052 145 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 ELF3P78545 371 aaPredicted RBP22.99■■□□□ 1.27
SSBP3-202ENST00000357475 POMZP3Q6PJE2 187 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 FAM109AQ8N4B1 249 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 RELTQ969Z4 430 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 C3orf49Q96BT1 292 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 DUS3LQ96G46 650 aaKnown RBP22.99■■□□□ 1.27
SSBP3-202ENST00000357475 OR2B2Q9GZK3 357 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 SLC6A15Q9H2J7 730 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 EVA1AQ9H8M9 152 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 HHATLQ9HCP6 504 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 ACER3Q9NUN7 267 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 B4GALT7Q9UBV7 327 aa22.99■■□□□ 1.27
SSBP3-202ENST00000357475 EFNA2O43921 213 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 FMO6PO60774 539 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 TIPRLO75663 272 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 HPNP05981 417 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 SFTPCP11686 197 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 PTNP21246 168 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 SLC1A3P43003 542 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 CDH12P55289 794 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 COPZ1P61923 177 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 KLRB1Q12918 225 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 TMEM44Q2T9K0 475 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 WBP2NLQ6ICG8 309 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 WDR88Q6ZMY6 472 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 PIWIL3Q7Z3Z3 882 aaKnown RBP22.98■■□□□ 1.27
SSBP3-202ENST00000357475 CISD2Q8N5K1 135 aaKnown RBP22.98■■□□□ 1.27
SSBP3-202ENST00000357475 OR14L1PQ8NHC6 308 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 PRRC1Q96M27 445 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 TRIM2Q9C040 744 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 A0A0B4J2E0 115 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 A0A1B0GX12 115 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 ACOT7O00154 380 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 TFECO14948 347 aaPredicted RBP22.98■■□□□ 1.27
SSBP3-202ENST00000357475 KRT36O76013 467 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 GP1BBP13224 206 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 TACR3P29371 465 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 TAS2R41P59536 307 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 CMPK2Q5EBM0 449 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 GDF7Q7Z4P5 450 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 SIAH3Q8IW03 269 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 ST8SIA1Q92185 356 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 ADAM19Q9H013 955 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 ZDHHC11Q9H8X9 412 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 TMEM27Q9HBJ8 222 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 MAN2C1Q9NTJ4 1040 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 VNN3Q9NY84 501 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 RIMS3Q9UJD0 308 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 ACAD8Q9UKU7 415 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 SLC6A5Q9Y345 797 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 TESMINQ9Y4I5 508 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 AP4S1Q9Y587 144 aa22.98■■□□□ 1.27
SSBP3-202ENST00000357475 KMT2BQ9UMN6 2715 aaPredicted RBP22.97■■□□□ 1.27
SSBP3-202ENST00000357475 MPDZO75970 2070 aa22.97■■□□□ 1.27
SSBP3-202ENST00000357475 ETV2O00321 342 aaPredicted RBP22.97■■□□□ 1.27
SSBP3-202ENST00000357475 UQCRBP14927 111 aa22.97■■□□□ 1.27
SSBP3-202ENST00000357475 INAQ16352 499 aa22.97■■□□□ 1.27
SSBP3-202ENST00000357475 SLC25A53Q5H9E4 307 aa22.97■■□□□ 1.27
SSBP3-202ENST00000357475 RAET1LQ5VY80 246 aa22.97■■□□□ 1.27
SSBP3-202ENST00000357475 ZNF605Q86T29 641 aa22.97■■□□□ 1.27
SSBP3-202ENST00000357475 POP5Q969H6 163 aaKnown RBP22.97■■□□□ 1.27
SSBP3-202ENST00000357475 WBP1Q96G27 269 aa22.97■■□□□ 1.27
SSBP3-202ENST00000357475 SLC41A3Q96GZ6 507 aa22.97■■□□□ 1.27
SSBP3-202ENST00000357475 OSGIN1Q9UJX0 560 aa22.97■■□□□ 1.27
SSBP3-202ENST00000357475 SLC7A7Q9UM01 511 aa22.97■■□□□ 1.27
SSBP3-202ENST00000357475 A0A087WZY1 265 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 OR2M5A3KFT3 312 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 RHCEP18577 417 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 CCNA2P20248 432 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 DLX5P56178 289 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 ALDH6A1Q02252 535 aaKnown RBP22.96■■□□□ 1.27
SSBP3-202ENST00000357475 MERTKQ12866 999 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 PPP1R8Q12972 351 aaKnown RBP22.96■■□□□ 1.27
SSBP3-202ENST00000357475 ALG10BQ5I7T1 473 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 ATG4DQ86TL0 474 aaPredicted RBP22.96■■□□□ 1.27
SSBP3-202ENST00000357475 RNF217Q8TC41 542 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 TMEM234Q8WY98 164 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 PIP5K1AQ99755 562 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 PRSS27Q9BQR3 290 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 S100A14Q9HCY8 104 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 ARMC1Q9NVT9 282 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 RPS6KB2Q9UBS0 482 aa22.96■■□□□ 1.27
SSBP3-202ENST00000357475 TRAPPC13A5PLN9 417 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 FAM47E-STBD1D6RA91 191 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 NPIPA5E9PKD4 350 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms