RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TO15178 435 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 SIGLEC5O15389 551 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 MAGEB4O15481 346 aaPredicted RBP7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 MT-ND4P03905 459 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 C6P13671 934 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 MC3RP41968 323 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 MAPK9P45984 424 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 PGDP52209 483 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 SIGLEC14Q08ET2 396 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 ST3GAL3Q11203 375 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 TSPAN31Q12999 210 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 ENTPD8Q5MY95 495 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC6A19Q695T7 634 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 CDC73Q6P1J9 531 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 DPPA4Q7L190 304 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 CXXC5Q7LFL8 322 aaKnown RBP7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 PRSS45Q7RTY3 260 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 AMZ2Q86W34 360 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 ARIH2OSQ8N7S6 290 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 CYB561A3Q8NBI2 242 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR13C5Q8NGS8 318 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 SUN3Q8TAQ9 357 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 TRMT10AQ8TBZ6 339 aaKnown RBP7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 PHOSPHO2Q8TCD6 241 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 HMGB4Q8WW32 186 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 DTD2Q96FN9 168 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 MCHR1Q99705 422 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 SPOCK3Q9BQ16 436 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 CRB3Q9BUF7 120 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 ALG8Q9BVK2 526 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 DPH1Q9BZG8 443 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 SEMA4CQ9C0C4 833 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 UCK1Q9HA47 277 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 MYEF2Q9P2K5 600 aaKnown RBP7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 WASH3PC4AMC7 463 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 L7N2F9 121 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 SULT1C2O00338 296 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 RNF13O43567 381 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC19A2O60779 497 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 RGS9O75916 674 aaPredicted RBP7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 PCCBP05166 539 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 POU3F2P20265 443 aaPredicted RBP7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 RFC3P40938 356 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 TAS2R38P59533 333 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 MC2RQ01718 297 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 STX4Q12846 297 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC25A35Q3KQZ1 300 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 PLA1AQ53H76 456 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 RNLSQ5VYX0 342 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 C18orf63Q68DL7 685 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 PDZD9Q8IXQ8 264 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 LRRC56Q8IYG6 542 aaPredicted RBP7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 EIF4E3Q8N5X7 224 aaKnown RBP7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 ACBD7Q8N6N7 88 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 TMEM99Q8N816 258 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR2T33Q8NG76 320 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR9A2Q8NGT5 310 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 GCDHQ92947 438 aaPredicted RBP7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 MRPS24Q96EL2 167 aaKnown RBP7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 WDR34Q96EX3 536 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 LMLNQ96KR4 655 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 CACNG6Q9BXT2 260 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 GSDMCQ9BYG8 508 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 DPAGT1Q9H3H5 408 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 LHX9Q9NQ69 397 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 KLHL28Q9NXS3 571 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 EPHA6Q9UF33 1036 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 ATG4BQ9Y4P1 393 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 ANAPC1Q9H1A4 1944 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC9B1P1A6NJY1 282 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 E9PI62 339 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 CDC42EP2O14613 210 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 CASC3O15234 703 aaKnown RBP7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 SURF4O15260 269 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 SDC3O75056 442 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 PTBP1P26599 531 aaKnown RBP eCLIP7.65□□□□□ -1.182e-6■■□□□ 13
CDC42SE1-201ENST00000357235 TM4SF4P48230 202 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 LBX1P52954 281 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 PSMD4P55036 377 aaKnown RBP7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 NTHL1P78549 312 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 SP3Q02447 781 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 DUSP2Q05923 314 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 FUT5Q11128 374 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC9A5Q14940 896 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 EOGTQ5NDL2 527 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 SFRP4Q6FHJ7 346 aaPredicted RBP7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR4C11Q6IEV9 310 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 TMEM88Q6PEY1 159 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 DCUN1D3Q8IWE4 304 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 IL17RCQ8NAC3 791 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 CAMKVQ8NCB2 501 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 PLA2G15Q8NCC3 412 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR5M3Q8NGP4 307 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 CD99L2Q8TCZ2 262 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 ELP5Q8TE02 316 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 SCARB1Q8WTV0 552 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 OSTF1Q92882 214 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 ELMOD3Q96FG2 381 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 MS4A3Q96HJ5 214 aa7.65□□□□□ -1.18
CDC42SE1-201ENST00000357235 SOSTQ9BQB4 213 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms