RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 HGFACQ04756 655 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 INPP5JQ15735 1006 aaPredicted RBP14.63□□□□□ -0.07
RTN3-205ENST00000356000 TMEM244Q5VVB8 128 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 DNAAF1Q8NEP3 725 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 OR4D9Q8NGE8 314 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 MYLIPQ8WY64 445 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 ASB16Q96NS5 453 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 TEFMQ96QE5 360 aaKnown RBP14.63□□□□□ -0.07
RTN3-205ENST00000356000 NRIP2Q9BQI9 281 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 MGME1Q9BQP7 344 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 PIGQQ9BRB3 760 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 TRMT61BQ9BVS5 477 aaKnown RBP14.63□□□□□ -0.07
RTN3-205ENST00000356000 SEMA6CQ9H3T2 930 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 MRPL17Q9NRX2 175 aaKnown RBP14.63□□□□□ -0.07
RTN3-205ENST00000356000 NPFFR2Q9Y5X5 522 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 LHX1P48742 406 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 ZBTB6Q15916 424 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 FAM27D1Q5T7N8 215 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 C9orf57Q5W0N0 161 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 ADNP2Q6IQ32 1131 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 ABHD13Q7L211 337 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 BHLHA9Q7RTU4 235 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 SCD5Q86SK9 330 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 PARGQ86W56 976 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 TEX26Q8N6G2 289 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 OR4K2Q8NGD2 314 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 MRPS31Q92665 395 aaKnown RBP14.62□□□□□ -0.07
RTN3-205ENST00000356000 JAM3Q9BX67 310 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 ZNF471Q9BX82 626 aaPredicted RBP14.62□□□□□ -0.07
RTN3-205ENST00000356000 LINC00597Q9H2U6 94 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 TMEM38AQ9H6F2 299 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 ABRACLQ9P1F3 81 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 IFITM10A6NMD0 228 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 IQCF5A8MTL0 148 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 KDM4EB2RXH2 506 aaPredicted RBP14.62□□□□□ -0.07
RTN3-205ENST00000356000 EMC8O43402 210 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 REM1O75628 298 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 OR2F2O95006 317 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 APBB3O95704 486 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 SNRPBP14678 240 aaKnown RBP14.62□□□□□ -0.07
RTN3-205ENST00000356000 CRABP1P29762 137 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 CASP9P55211 416 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 NRG3P56975 720 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 PCBP3P57721 371 aaKnown RBP14.62□□□□□ -0.07
RTN3-205ENST00000356000 HNRNPKP61978 463 aaKnown RBP eCLIP14.62□□□□□ -0.07
RTN3-205ENST00000356000 CDK6Q00534 326 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 OR2F1Q13607 317 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 GFOD2Q3B7J2 385 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 PSAPL1Q6NUJ1 521 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 ZNF322Q6U7Q0 402 aaPredicted RBP14.62□□□□□ -0.07
RTN3-205ENST00000356000 CD300LDQ6UXZ3 194 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 NPAS3Q8IXF0 933 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 CCDC54Q8NEL0 328 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 APOBEC4Q8WW27 367 aaKnown RBP14.62□□□□□ -0.07
RTN3-205ENST00000356000 MALSU1Q96EH3 234 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 TMEM231Q9H6L2 316 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 MIEF1Q9NQG6 463 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 ZNF282Q9UDV7 671 aaPredicted RBP14.62□□□□□ -0.07
RTN3-205ENST00000356000 MED6O75586 246 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 PCDH8O95206 1070 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 IGHA1P01876 353 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 TTPAP49638 278 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 BACE1P56817 501 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 COTL1Q14019 142 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 NKAPLQ5M9Q1 402 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 FBXO47Q5MNV8 452 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 POM121Q96HA1 1249 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 TEX101Q9BY14 249 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 SEC61A2Q9H9S3 476 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 PARPBPQ9NWS1 579 aa14.62□□□□□ -0.07
RTN3-205ENST00000356000 SIRT4Q9Y6E7 314 aaPredicted RBP14.62□□□□□ -0.07
RTN3-205ENST00000356000 UPK3BL1B0FP48 263 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 UPK3BL2E5RIL1 263 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 TSTD3H0UI37 97 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 GABARAPH6UMI1 98 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 FARS2O95363 451 aaKnown RBP14.61□□□□□ -0.07
RTN3-205ENST00000356000 ASGR2P07307 311 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 NME1P15531 152 aaKnown RBP14.61□□□□□ -0.07
RTN3-205ENST00000356000 XPAP23025 273 aaPredicted RBP14.61□□□□□ -0.07
RTN3-205ENST00000356000 CPT2P23786 658 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 CDX1P47902 265 aaPredicted RBP14.61□□□□□ -0.07
RTN3-205ENST00000356000 SLC6A11P48066 632 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 CLINT1Q14677 625 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 CHRDL2Q6WN34 429 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 IZUMO1Q8IYV9 350 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 EID2Q8N6I1 236 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 ZNF614Q8N883 585 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 OR52I2Q8NH67 350 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 TRAPPC12Q8WVT3 735 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 CDCA3Q99618 268 aaPredicted RBP14.61□□□□□ -0.07
RTN3-205ENST00000356000 LAT2Q9GZY6 243 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 SFXN1Q9H9B4 322 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 MMP26Q9NRE1 261 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 MAP4K5Q9Y4K4 846 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 TMEM184BQ9Y519 407 aaPredicted RBP14.61□□□□□ -0.07
RTN3-205ENST00000356000 KCNE1BA0A087WTH5 132 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 ZNF705EA8MWA4 302 aaPredicted RBP14.61□□□□□ -0.07
RTN3-205ENST00000356000 H7C0S8 307 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 PYCARD-AS1I3L0S3 204 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 TNFRSF10BO14763 440 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms