RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 C4orf46Q504U0 113 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 TCEAL5Q5H9L2 206 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 MEPCEQ7L2J0 689 aaKnown RBP12.64□□□□□ -0.39
TRIM4-203ENST00000355947 CMTM4Q8IZR5 234 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 TTC9Q92623 222 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 CAMK1GQ96NX5 476 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 FBXL3Q9UKT7 428 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 OR10H1Q9Y4A9 318 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 PLEKHM1Q9Y4G2 1056 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 IMPA2O14732 288 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 TGM5O43548 720 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 MAS1P04201 325 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 MMP12P39900 470 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 ERVK-25P63136 954 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 NDUFAF6Q330K2 333 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 TMEM69Q5SWH9 247 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 TMEM88Q6PEY1 159 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 DCUN1D3Q8IWE4 304 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 ACOT4Q8N9L9 421 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 DVL3Q92997 716 aaPredicted RBP12.64□□□□□ -0.39
TRIM4-203ENST00000355947 PTCHD1Q96NR3 888 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 TMEM168Q9H0V1 697 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 SLC38A1Q9H2H9 487 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 RETREG1Q9H6L5 497 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 SPAG17Q6Q759 2223 aa12.64□□□□□ -0.39
TRIM4-203ENST00000355947 ANXA2P2A6NMY6 339 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 GOSR2O14653 212 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 HOXA2O43364 376 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 CBX7O95931 251 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 TBX6O95947 436 aaPredicted RBP12.63□□□□□ -0.39
TRIM4-203ENST00000355947 HLA-DQB1P01920 261 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 SOD2P04179 222 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 MAKP20794 623 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 CLLU1Q5K131 121 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 LIX1LQ8IVB5 337 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 CPXM2Q8N436 756 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 HDDC3Q8N4P3 179 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 POGLUT1Q8NBL1 392 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 OR56B4Q8NH76 319 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 PAWRQ96IZ0 340 aaKnown RBP12.63□□□□□ -0.39
TRIM4-203ENST00000355947 FOXN4Q96NZ1 517 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 LGR4Q9BXB1 951 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 CPEB1Q9BZB8 566 aaKnown RBP12.63□□□□□ -0.39
TRIM4-203ENST00000355947 FBXO34Q9NWN3 711 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 SIDT1Q9NXL6 827 aaKnown RBP12.63□□□□□ -0.39
TRIM4-203ENST00000355947 A0A087WV48 116 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 PEX12O00623 359 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 ZNF35P13682 527 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 CXCL2P19875 107 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 HSD17B12Q53GQ0 312 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 POMZP3Q6PJE2 187 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 ATRAIDQ6UW56 229 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 SFTPA1Q8IWL2 248 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 GPALPP1Q8IXQ4 340 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 ZNF454Q8N9F8 522 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 OR52N1Q8NH53 320 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 TEAD3Q99594 435 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 SOSTQ9BQB4 213 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 AIFM2Q9BRQ8 373 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 CD93Q9NPY3 652 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 ASB6Q9NWX5 421 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 IKZF2Q9UKS7 526 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 GRXCR1A8MXD5 290 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 PRKNO60260 465 aaPredicted RBP12.63□□□□□ -0.39
TRIM4-203ENST00000355947 DOK2O60496 412 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 RP2O75695 350 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 PSMB1P20618 241 aaKnown RBP12.63□□□□□ -0.39
TRIM4-203ENST00000355947 ATP5A1P25705 553 aaKnown RBP12.63□□□□□ -0.39
TRIM4-203ENST00000355947 MPIP34949 423 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 CCR4P51679 360 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 DEFB134Q4QY38 66 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 SLC6A19Q695T7 634 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 NIPAL3Q6P499 406 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 ADIPOR2Q86V24 386 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 SHISA5Q8N114 240 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 ESX1Q8N693 406 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 OR51Q1Q8NH59 317 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 KCTD12Q96CX2 325 aaKnown RBP12.63□□□□□ -0.39
TRIM4-203ENST00000355947 PINK1Q9BXM7 581 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.63□□□□□ -0.39
TRIM4-203ENST00000355947 NOX4Q9NPH5 578 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 LHX9Q9NQ69 397 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 ASB4Q9Y574 426 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 HRH3Q9Y5N1 445 aa12.63□□□□□ -0.39
TRIM4-203ENST00000355947 UBE2QL1A1L167 161 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 SERTM1A2A2V5 107 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 PPM1BO75688 479 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 ABLIM3O94929 683 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 EGFP01133 1207 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 NFYAP23511 347 aaPredicted RBP12.62□□□□□ -0.39
TRIM4-203ENST00000355947 IL32P24001 234 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 STARP49675 285 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 ERVK-21P61565 698 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 PITPNAQ00169 270 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 GNA13Q14344 377 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 DUSP6Q16828 381 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 LRRN1Q6UXK5 716 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 HTR3DQ70Z44 454 aa12.62□□□□□ -0.39
TRIM4-203ENST00000355947 CNOT9Q92600 299 aaKnown RBP12.62□□□□□ -0.39
TRIM4-203ENST00000355947 RADILQ96JH8 1075 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms