RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TREX2Q9BQ50 279 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-201ENST00000355766 NDC1Q9BTX1 674 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 ENKD1Q9H0I2 346 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 CXXC4Q9H2H0 198 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 CACYBPQ9HB71 228 aaKnown RBP6.38□□□□□ -1.39
VPS13A-201ENST00000355766 BATF3Q9NR55 127 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 CUTCQ9NTM9 273 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 C14orf105Q9NVL8 296 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 SMPD3Q9NY59 655 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-201ENST00000355766 NDOR1Q9UHB4 597 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 SH3BGRL2Q9UJC5 107 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 SERTAD3Q9UJW9 196 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 C3orf18Q9UK00 162 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 FBXL4Q9UKA2 621 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 OAZ3Q9UMX2 235 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 IGLV3-12A0A075B6K2 115 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 IGKV3D-11A0A0A0MRZ8 115 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 A0A0G2JN53 185 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 G3V2T6 193 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 UPK1AO00322 258 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 ACOX3O15254 700 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 PRODHO43272 600 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 FGF17O60258 216 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 PRAMEF2O60811 474 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 CNOT3O75175 753 aaKnown RBP6.37□□□□□ -1.39
VPS13A-201ENST00000355766 RDH16O75452 317 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF682O95780 498 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 CST1P01037 141 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 SLPIP03973 132 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 IFNW1P05000 195 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 ALPLP05186 524 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 HMGN2P05204 90 aaKnown RBP6.37□□□□□ -1.39
VPS13A-201ENST00000355766 CD63P08962 238 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 RHCEP18577 417 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 KLK2P20151 261 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 MATN1P21941 496 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 PRKAR1BP31321 381 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 DNAJA1P31689 397 aaKnown RBP6.37□□□□□ -1.39
VPS13A-201ENST00000355766 MAP3K8P41279 467 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 STT3AP46977 705 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 SELENOPP49908 381 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 FOXL2P58012 376 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 KCNJ10P78508 379 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 PPP2R2BQ00005 443 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 FOLH1Q04609 750 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 MFAP5Q13361 173 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 DAG1Q14118 895 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 PRICKLE4Q2TBC4 344 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 EIPR1Q53HC9 387 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 SFT2D3Q587I9 215 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 NHSL2Q5HYW2 709 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 MLIPQ5VWP3 458 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 LPCAT4Q643R3 524 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 RHBDD2Q6NTF9 364 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 DHRS4L2Q6PKH6 230 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 TMEM107Q6UX40 140 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 EPHX4Q8IUS5 362 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 CBR4Q8N4T8 237 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 LINC00471Q8N535 108 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 HORMAD2Q8N7B1 307 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 STPG3Q8N7X2 389 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 CHDHQ8NE62 594 aaPredicted RBP6.37□□□□□ -1.39
VPS13A-201ENST00000355766 OR7G1Q8NGA0 311 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 OR9A2Q8NGT5 310 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 OR5AK3PQ8NH89 298 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 NFKBIDQ8NI38 313 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 FBXO30Q8TB52 745 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 Q8TCH9 128 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 PNPT1Q8TCS8 783 aaKnown RBP6.37□□□□□ -1.39
VPS13A-201ENST00000355766 TFAP2CQ92754 450 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 PROX1Q92786 737 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 NACC2Q96BF6 587 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 TAMM41Q96BW9 452 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 GIMAP5Q96F15 307 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 TMEM19Q96HH6 336 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 C7orf34Q96L11 122 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 ART5Q96L15 291 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF570Q96NI8 536 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 CSF3RQ99062 836 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 SEPHS2Q99611 448 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 MACROD1Q9BQ69 325 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 LMF2Q9BU23 707 aaKnown RBP6.37□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF350Q9GZX5 532 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 PIGUQ9H490 435 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 ANKRD19PQ9H560 264 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 REEP1Q9H902 201 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 NTN4Q9HB63 628 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 MKKSQ9NPJ1 570 aaPredicted RBP6.37□□□□□ -1.39
VPS13A-201ENST00000355766 ACAD8Q9UKU7 415 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 USP22Q9UPT9 525 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 CFL2Q9Y281 166 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 SLC9A8Q9Y2E8 581 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 IFT52Q9Y366 437 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 MRPS2Q9Y399 296 aaKnown RBP6.37□□□□□ -1.39
VPS13A-201ENST00000355766 PCDHGB6Q9Y5F9 930 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 PKDREJQ9NTG1 2253 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 SVILO95425 2214 aa6.37□□□□□ -1.39
VPS13A-201ENST00000355766 A0A0A6YYC8 382 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 GLOD5A6NK44 160 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms