RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TMEM269A0A1B0GVZ9 245 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 G3V3Y1 287 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 CD63P08962 238 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 KCNJ10P78508 379 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 RAB40BQ12829 278 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 SELPLGQ14242 412 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 SLC14A2Q15849 920 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 SLC5A12Q1EHB4 618 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 TMEM176BQ3YBM2 270 aaPredicted RBP12.35□□□□□ -0.43
SCN8A-202ENST00000355133 DCAF12Q5T6F0 453 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 TMEM244Q5VVB8 128 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 PIWIL3Q7Z3Z3 882 aaKnown RBP12.35□□□□□ -0.43
SCN8A-202ENST00000355133 CCDC28AQ8IWP9 274 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 ZBED3Q96IU2 234 aaPredicted RBP12.35□□□□□ -0.43
SCN8A-202ENST00000355133 BOKQ9UMX3 212 aaPredicted RBP12.35□□□□□ -0.43
SCN8A-202ENST00000355133 WDR37Q9Y2I8 494 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 CACNG2Q9Y698 323 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 HHLA1C9JL84 531 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 FOXE1O00358 373 aaPredicted RBP12.35□□□□□ -0.43
SCN8A-202ENST00000355133 F10P00742 488 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 BDH1Q02338 343 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 MRPL2Q5T653 305 aaKnown RBP12.35□□□□□ -0.43
SCN8A-202ENST00000355133 OR7E24Q6IFN5 339 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 BORAQ6PGQ7 559 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 VHLLQ6RSH7 139 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 FAM57BQ71RH2 274 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 CNTN4Q8IWV2 1026 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 ABHD11Q8NFV4 315 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 OR4K15Q8NH41 348 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 SLC6A17Q9H1V8 727 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 MRPL33O75394 65 aaKnown RBP12.35□□□□□ -0.43
SCN8A-202ENST00000355133 NUDT7P0C024 238 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 MAGEA6P43360 314 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 LRRC26Q2I0M4 334 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 PGGHGQ32M88 737 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 ALKAL1Q6UXT8 129 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 TECPR1Q7Z6L1 1165 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 GPR149Q86SP6 731 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 PGBD5Q8N414 524 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 TMEM163Q8TC26 289 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 FNDC8Q8TC99 324 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 GORASP2Q9H8Y8 452 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 ARNT2Q9HBZ2 717 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 LRFN1Q9P244 771 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 KLHL42Q9P2K6 505 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 OR14J1Q9UGF5 321 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 BLACEA4D250 179 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 F5H5P2 479 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 ARPC5O15511 151 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 BCAS1O75363 584 aaPredicted RBP12.35□□□□□ -0.43
SCN8A-202ENST00000355133 CBX7O95931 251 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 TFP02787 698 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 IL32P24001 234 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 RAB38P57729 211 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 MGAT3Q09327 533 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 ELP2Q6IA86 826 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 AGBL5Q8NDL9 886 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 CXCL16Q9H2A7 254 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 EGLN3Q9H6Z9 239 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 RAB9BQ9NP90 201 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 SLAMF8Q9P0V8 285 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 NAV1Q8NEY1 1877 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 CD300LBA8K4G0 201 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 ARPC1BO15143 372 aaKnown RBP12.35□□□□□ -0.43
SCN8A-202ENST00000355133 SPDEFO95238 335 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 CSF1P09603 554 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 HTR2BP41595 481 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 GPR18Q14330 331 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 LCN10Q6JVE6 187 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 TRNP1Q6NT89 227 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 FAM198BQ6UWH4 519 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 OR4F15Q8NGB8 312 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 SLC39A13Q96H72 371 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 SLC22A12Q96S37 553 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 ELOVL3Q9HB03 270 aa12.35□□□□□ -0.43
SCN8A-202ENST00000355133 MYH13Q9UKX3 1938 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 H3BMQ9 156 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 EGFP01133 1207 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 AKAIN1P0CW23 69 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 MYOGP15173 224 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 ZNF136P52737 540 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 CBLL1Q75N03 491 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 ZNF534Q76KX8 674 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 GRAMD2AQ8IUY3 354 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 OR5L1Q8NGL2 311 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 OR13C2Q8NGS9 318 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 COG8Q96MW5 612 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 VN1R3Q9BXE9 311 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 AGPAT4Q9NRZ5 378 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 ASF1BQ9NVP2 202 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 EDN3P14138 238 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 OPRL1P41146 370 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 PTCRAQ6ISU1 281 aaPredicted RBP12.34□□□□□ -0.43
SCN8A-202ENST00000355133 OR2T35Q8NGX2 323 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 QRSL1Q9H0R6 528 aaKnown RBP12.34□□□□□ -0.43
SCN8A-202ENST00000355133 SLAMF7Q9NQ25 335 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 HSFX1Q9UBD0 423 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 HHLA2Q9UM44 414 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 CCDC163A0A0D9SF12 145 aa12.34□□□□□ -0.43
SCN8A-202ENST00000355133 SUSD5O60279 629 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms