RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 WDR34Q96EX3 536 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 MRPL48Q96GC5 212 aaKnown RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 SLC35G5Q96KT7 338 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 LRR1Q96L50 414 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 ZNF607Q96SK3 696 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 MS4A8Q9BY19 250 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 MTIF3Q9H2K0 278 aaKnown RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 EGLN3Q9H6Z9 239 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 NT5DC2Q9H857 520 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 SIRT3Q9NTG7 399 aaPredicted RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 DEC1Q9P2X7 70 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 SHISA3A0PJX4 238 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 OR6C68A6NDL8 312 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 HEPACAM2A8MVW5 462 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 NDUFS4O43181 175 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 HTR3BO95264 441 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 EIF4EP06730 217 aaKnown RBP8.72□□□□□ -1.01
SMG6-202ENST00000354901 TFPIP10646 304 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 HK1P19367 917 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 MAPK9P45984 424 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 PXNP49023 591 aaPredicted RBP8.72□□□□□ -1.01
SMG6-202ENST00000354901 ARFIP1P53367 373 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 LIMK1P53667 647 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 PSMA6P60900 246 aaKnown RBP8.72□□□□□ -1.01
SMG6-202ENST00000354901 ZNF234Q14588 700 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 ZNF658BQ4V348 819 aaPredicted RBP8.72□□□□□ -1.01
SMG6-202ENST00000354901 FAM27D1Q5T7N8 215 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 HDDC3Q8N4P3 179 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 C16orf58Q96GQ5 468 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 ZC3HAV1LQ96H79 300 aaKnown RBP8.72□□□□□ -1.01
SMG6-202ENST00000354901 OR2M2Q96R28 347 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 GPA33Q99795 319 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 ATF6BQ99941 703 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 KLHL31Q9H511 634 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 TMEM231Q9H6L2 316 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 ZNF275Q9NSD4 429 aaPredicted RBP8.72□□□□□ -1.01
SMG6-202ENST00000354901 PURGQ9UJV8 347 aaKnown RBP8.72□□□□□ -1.01
SMG6-202ENST00000354901 E9PI62 339 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 CD63P08962 238 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 MMP11P24347 488 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 CCR8P51685 355 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 ZP1P60852 638 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 DGCR2P98153 550 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 HNRNPA1L2Q32P51 320 aaKnown RBP8.72□□□□□ -1.01
SMG6-202ENST00000354901 PLA1AQ53H76 456 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 LCTLQ6UWM7 567 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 BEND4Q6ZU67 534 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 SSX6Q7RTT6 188 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 NUDT13Q86X67 352 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 FAM181AQ8N9Y4 354 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 OR6S1Q8NH40 331 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 THAP6Q8TBB0 222 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 HSD17B8Q92506 261 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 SCMH1Q96GD3 660 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 AHCYL2Q96HN2 611 aaKnown RBP8.72□□□□□ -1.01
SMG6-202ENST00000354901 LRIG1Q96JA1 1093 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 ARL5BQ96KC2 179 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 RHOVQ96L33 236 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 C10orf90Q96M02 699 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 TEFMQ96QE5 360 aaKnown RBP8.72□□□□□ -1.01
SMG6-202ENST00000354901 SEMA4CQ9C0C4 833 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 GLIPR2Q9H4G4 154 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 SLC6A20Q9NP91 592 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 LHX9Q9NQ69 397 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 CNOT2Q9NZN8 540 aaKnown RBP8.72□□□□□ -1.01
SMG6-202ENST00000354901 CNIH4Q9P003 139 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 PLEKHM1Q9Y4G2 1056 aa8.72□□□□□ -1.01
SMG6-202ENST00000354901 MTCL1Q9Y4B5 1905 aaKnown RBP8.71□□□□□ -1.01
SMG6-202ENST00000354901 A0A1B0GVI7 797 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 OR52A4PA6NMU1 304 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 ZNF593O00488 134 aaPredicted RBP8.71□□□□□ -1.01
SMG6-202ENST00000354901 ARPC1BO15143 372 aaKnown RBP8.71□□□□□ -1.01
SMG6-202ENST00000354901 PGRMC2O15173 223 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 MPZL2O60487 215 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 PAK4O96013 591 aaPredicted RBP8.71□□□□□ -1.01
SMG6-202ENST00000354901 SLC35G4P0C7Q5 338 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 APEHP13798 732 aaKnown RBP8.71□□□□□ -1.01
SMG6-202ENST00000354901 ITGB7P26010 798 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 PRKAR1BP31321 381 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 MLLT11Q13015 90 aaPredicted RBP8.71□□□□□ -1.01
SMG6-202ENST00000354901 ALKBH1Q13686 389 aaKnown RBP8.71□□□□□ -1.01
SMG6-202ENST00000354901 CAMK1Q14012 370 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 GUCA2BQ16661 112 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 SLC27A4Q6P1M0 643 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 GDPGP1Q6ZNW5 385 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 SERPINA12Q8IW75 414 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 KLHDC8AQ8IYD2 350 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 TMEM163Q8TC26 289 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 ZG16BQ96DA0 208 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 WBP1Q96G27 269 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 ZNF354BQ96LW1 612 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 PAPOLGQ9BWT3 736 aaKnown RBP8.71□□□□□ -1.01
SMG6-202ENST00000354901 PLA2G12AQ9BZM1 189 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 DPEP2Q9H4A9 486 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 CA10Q9NS85 328 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 MYEF2Q9P2K5 600 aaKnown RBP8.71□□□□□ -1.01
SMG6-202ENST00000354901 DHCR7Q9UBM7 475 aaKnown RBP8.71□□□□□ -1.01
SMG6-202ENST00000354901 GHRLQ9UBU3 117 aa8.71□□□□□ -1.01
SMG6-202ENST00000354901 RPL36Q9Y3U8 105 aaKnown RBP8.71□□□□□ -1.01
SMG6-202ENST00000354901 KCNE3Q9Y6H6 103 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms