RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 CKMT1AP12532 417 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 CAMK2DQ13557 499 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 B3GNT7Q8NFL0 401 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 KLHL15Q96M94 604 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 TREX2Q9BQ50 279 aaPredicted RBP9.03□□□□□ -0.96
GABPA-201ENST00000354828 OR10A2Q9H208 303 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 EVA1AQ9H8M9 152 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 TESQ9UGI8 421 aaKnown RBP9.03□□□□□ -0.96
GABPA-201ENST00000354828 ZNF587BE7ETH6 402 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 F13BP05160 661 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 DRD3P35462 400 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 ADH7P40394 386 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 PCBP4P57723 403 aaKnown RBP9.03□□□□□ -0.96
GABPA-201ENST00000354828 KCTD21Q4G0X4 260 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 RUNDC3AQ59EK9 446 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 NDUFAF7Q7L592 441 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 SERPINA11Q86U17 422 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 SNX29P2Q8IUI4 249 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 PIAS4Q8N2W9 510 aaPredicted RBP9.03□□□□□ -0.96
GABPA-201ENST00000354828 ZNF566Q969W8 418 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 SORT1Q99523 831 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 DUSP15Q9H1R2 295 aaPredicted RBP9.03□□□□□ -0.96
GABPA-201ENST00000354828 ARMC1Q9NVT9 282 aa9.03□□□□□ -0.96
GABPA-201ENST00000354828 TRAV17A0A0B4J275 112 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 SMIM30A4D0T7 59 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 GLSO94925 669 aaPredicted RBP9.02□□□□□ -0.96
GABPA-201ENST00000354828 WNT11O96014 354 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 GPX3P22352 226 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 GSTT1P30711 240 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 SOX3P41225 446 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 ETV4P43268 484 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 MAGEA3P43357 314 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 PRKCDQ05655 676 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 DCTN2Q13561 401 aaKnown RBP9.02□□□□□ -0.96
GABPA-201ENST00000354828 OR9Q2Q8NGE9 314 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 LINC00615Q96LM1 132 aaPredicted RBP9.02□□□□□ -0.96
GABPA-201ENST00000354828 SCGB3A2Q96PL1 93 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 WDR12Q9GZL7 423 aaKnown RBP9.02□□□□□ -0.96
GABPA-201ENST00000354828 PPT2Q9UMR5 302 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 ZDBF2Q9HCK1 2354 aa9.02□□□□□ -0.96
GABPA-201ENST00000354828 TEX13DA0A0J9YY54 714 aaPredicted RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 TVP23AA6NH52 213 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 CDRT1O95170 752 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 CLIC3O95833 236 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 PDGFBP01127 241 aaPredicted RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 FCGR2AP12318 317 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 HTR5AP47898 357 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 MVKQ03426 396 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 TMEM207Q6UWW9 146 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 BEND4Q6ZU67 534 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 CYP4V2Q6ZWL3 525 aaPredicted RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 ACOT11Q8WXI4 607 aaPredicted RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 ELP4Q96EB1 424 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 S100A16Q96FQ6 103 aaKnown RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 ZNF300Q96RE9 604 aaPredicted RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 BARD1Q99728 777 aaKnown RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 P4HTMQ9NXG6 502 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 SATB2Q9UPW6 733 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 ATAD5Q96QE3 1844 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 A0A1B0GTQ1 180 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 FAM172BPA6NC97 362 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 KDM4EB2RXH2 506 aaPredicted RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 H0YJX3 145 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 TRHRP34981 398 aaPredicted RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 FAM53BQ14153 422 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 FAM205BPQ63HN1 556 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 KLBQ86Z14 1044 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 CPOQ8IVL8 374 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 MORN4Q8NDC4 146 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 OR1J2Q8NGS2 313 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 C15orf40Q8WUR7 153 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 APH1AQ96BI3 265 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 SLC45A3Q96JT2 553 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 TXLNGYQ9BZA5 131 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 CXorf56Q9H5V9 222 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 TIMM8AO60220 97 aaPredicted RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 FGF17O60258 216 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 LCMT2O60294 686 aaKnown RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 OR2J2O76002 312 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 HSD17B1P14061 328 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 ARNTP27540 789 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 PDE7AQ13946 482 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 TRMT12Q53H54 448 aaKnown RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 C5orf46Q6UWT4 87 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 ZNF782Q6ZMW2 699 aaPredicted RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 LIMS2Q7Z4I7 341 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 TMPRSS12Q86WS5 348 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 HS3ST5Q8IZT8 346 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 DTWD1Q8N5C7 304 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 GOT1L1Q8NHS2 421 aaPredicted RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 GCDHQ92947 438 aaPredicted RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 DGCR14Q96DF8 476 aaKnown RBP9.02□□□□□ -0.97
GABPA-201ENST00000354828 MED18Q9BUE0 208 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 NDRG3Q9UGV2 375 aa9.02□□□□□ -0.97
GABPA-201ENST00000354828 CLPXO76031 633 aa9.01□□□□□ -0.97
GABPA-201ENST00000354828 OSMP13725 252 aa9.01□□□□□ -0.97
GABPA-201ENST00000354828 DCKP27707 260 aa9.01□□□□□ -0.97
GABPA-201ENST00000354828 ACVR1Q04771 509 aa9.01□□□□□ -0.97
GABPA-201ENST00000354828 CEACAM19Q7Z692 300 aa9.01□□□□□ -0.97
GABPA-201ENST00000354828 WDR5BQ86VZ2 330 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms