RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 VTCN1Q7Z7D3 282 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 OR6T1Q8NGN1 323 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 OR5M9Q8NGP3 310 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 VANGL1Q8TAA9 524 aaPredicted RBP20.02■□□□□ 0.8
SHMT1-203ENST00000354098 ST8SIA1Q92185 356 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 GORASP2Q9H8Y8 452 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 ACER3Q9NUN7 267 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 MAGEL2Q9UJ55 1249 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 BAG5Q9UL15 447 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 SNX13Q9Y5W8 968 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 NBASA2RRP1 2371 aa20.02■□□□□ 0.79
SHMT1-203ENST00000354098 DNAJC13O75165 2243 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 SLC19A2O60779 497 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 GMNNO75496 209 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 OPN1LWP04000 364 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 ABOP16442 354 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 ZNF17P17021 662 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 HTR2AP28223 471 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 EIF1P41567 113 aaKnown RBP20.01■□□□□ 0.79
SHMT1-203ENST00000354098 OR1E2P47887 323 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 PGM2L1Q6PCE3 622 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 POMZP3Q6PJE2 187 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 CADM2Q8N3J6 435 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 TMEM234Q8WY98 164 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 PROX1Q92786 737 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 RELTQ969Z4 430 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 SARAFQ96BY9 339 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 CCDC124Q96CT7 223 aaKnown RBP20.01■□□□□ 0.79
SHMT1-203ENST00000354098 MRGPRX4Q96LA9 322 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 ADPRHL2Q9NX46 363 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 ACAD8Q9UKU7 415 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 ZNF835Q9Y2P0 537 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 RELNP78509 3460 aa20.01■□□□□ 0.79
SHMT1-203ENST00000354098 OR14I1A6ND48 311 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 ACTL6AO96019 429 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 GP1BBP13224 206 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 LHX2P50458 406 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 MERTKQ12866 999 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 BNIP2Q12982 314 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 TRIM25Q14258 630 aaKnown RBP20■□□□□ 0.79
SHMT1-203ENST00000354098 EMC4Q5J8M3 183 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 PLEKHM3Q6ZWE6 761 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 TMEM185BQ9H7F4 350 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 PNPLA3Q9NST1 481 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 DCAF13Q9NV06 445 aaKnown RBP20■□□□□ 0.79
SHMT1-203ENST00000354098 TPOP07202 933 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 PEPDP12955 493 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 UQCRBP14927 111 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 ADH6P28332 368 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 GCKP35557 465 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 SLC1A3P43003 542 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 DLX5P56178 289 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 COPZ1P61923 177 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 EIF2S3LQ2VIR3 472 aaKnown RBP20■□□□□ 0.79
SHMT1-203ENST00000354098 GXYLT1Q4G148 440 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 CYP2R1Q6VVX0 501 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 ATCAYQ86WG3 371 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 CARM1Q86X55 608 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 FAM86B1Q8N7N1 296 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 FAM57AQ8TBR7 257 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 SMPDL3BQ92485 455 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 WDYHV1Q96HA8 205 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 LRMDAQ9H2I8 198 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 CTPS2Q9NRF8 586 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 OSGIN2Q9Y236 505 aa20■□□□□ 0.79
SHMT1-203ENST00000354098 H0YC42 278 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 POU3F2P20265 443 aaPredicted RBP19.99■□□□□ 0.79
SHMT1-203ENST00000354098 ATP6V1B2P21281 511 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 TACR3P29371 465 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 TPD52P55327 224 aaPredicted RBP19.99■□□□□ 0.79
SHMT1-203ENST00000354098 CLDN18P56856 261 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 CLDN20P56880 219 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 SRYQ05066 204 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 RBPJQ06330 500 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 WBP2NLQ6ICG8 309 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 GRINAQ7Z429 371 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 CD163Q86VB7 1156 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 UBQLNLQ8IYU4 475 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 ATP6V1C2Q8NEY4 427 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 OR52E4Q8NGH9 312 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 LZICQ8WZA0 190 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 HSH2DQ96JZ2 352 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 NSMCE2Q96MF7 247 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 ADAM19Q9H013 955 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 ACTR3BQ9P1U1 418 aa19.99■□□□□ 0.79
SHMT1-203ENST00000354098 ZNF708P17019 499 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 CLDN15P56746 228 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 ENPP6Q6UWR7 440 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 Q6ZPB1 254 aaPredicted RBP19.98■□□□□ 0.79
SHMT1-203ENST00000354098 TSPYL5Q86VY4 417 aaPredicted RBP19.98■□□□□ 0.79
SHMT1-203ENST00000354098 ADGRG3Q86Y34 549 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 ULK2Q8IYT8 1036 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 LILRA2Q8N149 483 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 MCHR1Q99705 422 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 EVA1AQ9H8M9 152 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 ALKBH4Q9NXW9 302 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 TESQ9UGI8 421 aaKnown RBP19.98■□□□□ 0.79
SHMT1-203ENST00000354098 SH3BGRL2Q9UJC5 107 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 TINAGQ9UJW2 476 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 OSGIN1Q9UJX0 560 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms