RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 OR4Q3Q8NH05 313 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 BBS10Q8TAM1 723 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 SAP25Q8TEE9 199 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 DNAJA4Q8WW22 397 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-204ENST00000353317 C10orf90Q96M02 699 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 SPATA5L1Q9BVQ7 753 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 SEMA4GQ9NTN9 838 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 TAS2R7Q9NYW3 318 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 TMEM184BQ9Y519 407 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-204ENST00000353317 HSPB11Q9Y547 144 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 SURF4O15260 269 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 AKAP8O43823 692 aaKnown RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 ORC5O43913 435 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 GNSP15586 552 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 ELK1P19419 428 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 TRHRP34981 398 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 OMPP47874 163 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 DSG2Q14126 1118 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 ZNF57Q68EA5 555 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 TCEAL6Q6IPX3 200 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 RASSF6Q6ZTQ3 369 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 OR4M2Q8NGB6 313 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 OR5H6Q8NGV6 325 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 GNPDA2Q8TDQ7 276 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 SPRYD4Q8WW59 207 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 TCEAL3Q969E4 200 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 GAL3ST3Q96A11 431 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 C16orf58Q96GQ5 468 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 ZNF764Q96H86 408 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 ZC3H10Q96K80 434 aaKnown RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 COQ7Q99807 217 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 GTPBP2Q9BX10 602 aaKnown RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 UCK1Q9HA47 277 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 SLC35C2Q9NQQ7 365 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 CHST2Q9Y4C5 530 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 DMXL1Q9Y485 3027 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 A0A1B0GTQ1 180 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 INMT-MINDY4F8WBC2 141 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 ARHGEF9O43307 516 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 LANCL1O43813 399 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 ERAL1O75616 437 aaKnown RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 SLC2A10O95528 541 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 CFIP05156 583 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 SLC35G6P0C7Q6 338 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 GAAP10253 952 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 TFPIP10646 304 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 PTBP1P26599 531 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 CD1CP29017 333 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 EPHA8P29322 1005 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 OR3A3P47888 321 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 INPP1P49441 399 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 KHKP50053 298 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 SIM1P81133 766 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 PEAR1Q5VY43 1037 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 ZNF574Q6ZN55 896 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 VRK2Q86Y07 508 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 KLBQ86Z14 1044 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 MCATQ8IVS2 390 aaKnown RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 NKAIN4Q8IVV8 208 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 CCDC116Q8IYX3 515 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 CSNK1A1LQ8N752 337 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 DTX3Q8N9I9 347 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 ZNF681Q96N22 645 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 SECISBP2Q96T21 854 aaKnown RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 NUDT22Q9BRQ3 303 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 PINK1Q9BXM7 581 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 ISG20L2Q9H9L3 353 aaKnown RBP7.95□□□□□ -1.14
TRIM55-204ENST00000353317 CAPN10Q9HC96 672 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 POLHQ9Y253 713 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 NTNG1Q9Y2I2 539 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 CSNK1G3Q9Y6M4 447 aa7.95□□□□□ -1.14
TRIM55-204ENST00000353317 KMT2EQ8IZD2 1858 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 A0A0G2JPF8 293 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 RHPN2P1A8MT19 583 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 HNRNPCL2B2RXH8 293 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 HNRNPCL3B7ZW38 293 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 H3BMH7 237 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 FOXS1O43638 330 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 SIGLEC6O43699 453 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 NUDT21O43809 227 aaKnown RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 PAHP00439 452 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 IGHA1P01876 353 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 SP9P0CG40 484 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 HNRNPCL4P0DMR1 293 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 ATXN8OSP0DMR3 200 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 SLC6A1P30531 599 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 STXBP1P61764 594 aaKnown RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 ID2Q02363 134 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 ACSM1Q08AH1 577 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 DBPQ10586 325 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 MAB21L1Q13394 359 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 LTB4RQ15722 352 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 ZNF311Q5JNZ3 666 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 ARMC6Q6NXE6 501 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 GUSBP11Q6P575 273 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 CREB3L2Q70SY1 520 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 KLHL36Q8N4N3 616 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 SIRT6Q8N6T7 355 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 SLC37A3Q8NCC5 494 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 OR9A4Q8NGU2 314 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms