RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 OR8S1Q8NH09 359 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 AUTS2Q8WXX7 1259 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 RAD51AP1Q96B01 352 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 S100A16Q96FQ6 103 aaKnown RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 OR14A2Q96R54 314 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 MCHR1Q99705 422 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TRMT61BQ9BVS5 477 aaKnown RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 GPR62Q9BZJ7 368 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 OPN4Q9UHM6 478 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 ASF1AQ9Y294 204 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 NPFFR2Q9Y5X5 522 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 FAM86C2PA6NEL3 165 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 NAP1L6A6NFF2 107 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TMEM200CA6NKL6 621 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 MPTX1A8MV57 137 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF705EA8MWA4 302 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 FAM25EA8MYX2 175 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 IGHA1P01876 353 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 C8orf89P0DMQ9 161 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 NPPBP16860 134 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SPINT3P49223 89 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SNRPEP62304 92 aaKnown RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SNRPD1P62314 119 aaKnown RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SHC2P98077 582 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 EFNB1P98172 346 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 UBXN2BQ14CS0 331 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 HYAL4Q2M3T9 481 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 HFEQ30201 348 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 DCAF12L2Q5VW00 463 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF626Q68DY1 528 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 OR7E24Q6IFN5 339 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TMEM220Q6QAJ8 160 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TSSK4Q6SA08 328 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 BAIAP2L2Q6UXY1 529 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 FAM83HQ6ZRV2 1179 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF467Q7Z7K2 595 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 PUSL1Q8N0Z8 303 aaKnown RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 THEM6Q8WUY1 208 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 OTUB2Q96DC9 234 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 CAMK1GQ96NX5 476 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 MNTQ99583 582 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 DPH1Q9BZG8 443 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 ANKRD19PQ9H560 264 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SUV39H2Q9H5I1 410 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 EXO5Q9H790 373 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SYNPO2LQ9H987 977 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 COMMD9Q9P000 198 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 ACAD8Q9UKU7 415 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 EXOGQ9Y2C4 368 aaKnown RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 A0A0G2JK05 382 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 OR6C68A6NDL8 312 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TXNL1O43396 289 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 HYAL3O43820 417 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 ITGA10O75578 1167 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 EIF3GO75821 320 aaKnown RBP eCLIP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SNAPC5O75971 98 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 KLHL18O94889 574 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 FARS2O95363 451 aaKnown RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 ADH7P40394 386 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 MAPK8P45983 427 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 PTH2RP49190 550 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 ARFIP1P53367 373 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 PNLIPRP1P54315 467 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 H2BFSP57053 126 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 ACSM1Q08AH1 577 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TRAM1Q15629 374 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 RPE65Q16518 533 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 CCL14Q16627 93 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 C2orf68Q2NKX9 166 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 UBE2NLQ5JXB2 153 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 MANEAQ5SRI9 462 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 AVPI1Q5T686 147 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 LDLRAD3Q86YD5 345 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TRAPPC5Q8IUR0 188 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TMIEQ8NEW7 156 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 OR2AP1Q8NGE2 309 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TMEM255BQ8WV15 326 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SNX33Q8WV41 574 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SMPDL3BQ92485 455 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 PLD4Q96BZ4 506 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SCLYQ96I15 445 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 RIOK2Q9BVS4 552 aaKnown RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 PINK1Q9BXM7 581 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SLC25A32Q9H2D1 315 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 UBQLN3Q9H347 655 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TMEM231Q9H6L2 316 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SPHK1Q9NYA1 384 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 WSB2Q9NYS7 404 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 CDV3Q9UKY7 258 aaKnown RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 HELZP42694 1942 aaKnown RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 ARID1BQ8NFD5 2236 aaPredicted RBP7.09□□□□□ -1.28
BRCA1-201ENST00000352993 CCL15-CCL14A0A0B4J2E2 113 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 TRBV2A0A0J9YWF9 115 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 PRAMEF27A3QJZ7 478 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF840PA6NDX5 716 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 PSMD9O00233 223 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 B4GALT2O60909 372 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 DDNO94850 711 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 CRYBA1P05813 215 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms