RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 C17orf47Q8NEP4 570 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 TMEM19Q96HH6 336 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 BBS4Q96RK4 519 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 BHLHE41Q9C0J9 482 aaPredicted RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 MRPL17Q9NRX2 175 aaKnown RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 IL20RAQ9UHF4 553 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 ZNF230Q9UIE0 474 aaPredicted RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 ASF1AQ9Y294 204 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 AK6Q9Y3D8 172 aaKnown RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 KIAA1671Q9BY89 1806 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 IGLV3-10A0A075B6K4 115 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 ZC3H12DA2A288 527 aaKnown RBP12.31□□□□□ -0.44
IFT88-202ENST00000351808 MEIS3P2A8K0S8 358 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 PCSK1P29120 753 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 SDHAP31040 664 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 AKR1C3P42330 323 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 GPR15P49685 360 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 ENTPD8Q5MY95 495 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 NBPF12Q5TAG4 269 aaPredicted RBP12.31□□□□□ -0.44
IFT88-202ENST00000351808 OR52W1Q6IF63 320 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 RPTNQ6XPR3 784 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 SLC36A1Q7Z2H8 476 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 TMEM86AQ8N2M4 240 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 ZNF561Q8N587 486 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 SNX33Q8WV41 574 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 CLCC1Q96S66 551 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 TIMP4Q99727 224 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 SSX3Q99909 188 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 CNIH4Q9P003 139 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 ABRACLQ9P1F3 81 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 KLHL9Q9P2J3 617 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 CENPFP49454 3210 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 A0A0D9SG52 128 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 ANTXRLA6NF34 631 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 GABARAPH6UMI1 98 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 SYT5O00445 386 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 NTN1O95631 604 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 HOXD9P28356 352 aaPredicted RBP12.31□□□□□ -0.44
IFT88-202ENST00000351808 HTR5AP47898 357 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 SLC6A12P48065 614 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 CSNK1DP48730 415 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 SPCS3P61009 180 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 PRSS53Q2L4Q9 553 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 NCMAPQ5T1S8 102 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 BAIAP2L2Q6UXY1 529 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 SSX6Q7RTT6 188 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 LSRQ86X29 649 aaPredicted RBP12.31□□□□□ -0.44
IFT88-202ENST00000351808 OR5J2Q8NH18 312 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 BBS10Q8TAM1 723 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 CD99L2Q8TCZ2 262 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 PAQR8Q8TEZ7 354 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 HIST1H2BAQ96A08 127 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 LURAP1Q96LR2 239 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 SEC11CQ9BY50 192 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 TMPRSS5Q9H3S3 457 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 PLEKHA1Q9HB21 404 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 MAN2C1Q9NTJ4 1040 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 TAS2R10Q9NYW0 307 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 ACAD8Q9UKU7 415 aa12.31□□□□□ -0.44
IFT88-202ENST00000351808 A0A1W2PRQ8 180 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 SERTM1A2A2V5 107 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 FADS1O60427 444 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 SLC34A2O95436 690 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 POP4O95707 220 aaKnown RBP12.3□□□□□ -0.44
IFT88-202ENST00000351808 IGHV2-5P01817 119 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 ASGR2P07307 311 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 HOXC4P09017 264 aaPredicted RBP12.3□□□□□ -0.44
IFT88-202ENST00000351808 HPGDP15428 266 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 XPAP23025 273 aaPredicted RBP12.3□□□□□ -0.44
IFT88-202ENST00000351808 YBEYP58557 167 aaPredicted RBP12.3□□□□□ -0.44
IFT88-202ENST00000351808 TUSC3Q13454 348 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 TGIF1Q15583 401 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 MAPK14Q16539 360 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 SDHAF4Q5VUM1 108 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 GPR142Q7Z601 462 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 C11orf96Q7Z7L8 435 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 LRRC56Q8IYG6 542 aaPredicted RBP12.3□□□□□ -0.44
IFT88-202ENST00000351808 ARL6IP6Q8N6S5 226 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 TMEM99Q8N816 258 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 ZNF383Q8NA42 475 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 MORN4Q8NDC4 146 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 BRIX1Q8TDN6 353 aaKnown RBP12.3□□□□□ -0.44
IFT88-202ENST00000351808 FCAMRQ8WWV6 532 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 ZNF354BQ96LW1 612 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 UTP23Q9BRU9 249 aaKnown RBP12.3□□□□□ -0.44
IFT88-202ENST00000351808 AP5M1Q9H0R1 490 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 MEPEQ9NQ76 525 aaPredicted RBP12.3□□□□□ -0.44
IFT88-202ENST00000351808 UQCC1Q9NVA1 299 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 H2AFY2Q9P0M6 372 aaPredicted RBP12.3□□□□□ -0.44
IFT88-202ENST00000351808 PTPRDP23468 1912 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 ANKRD20A5PA0PJZ0 165 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 C9orf170A2RU37 121 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 ZNF879B4DU55 563 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 GPR37L1O60883 481 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 AGAP20933 346 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 POU4F2Q12837 409 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 NAE1Q13564 534 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 CDNFQ49AH0 187 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 UBXN11Q5T124 520 aa12.3□□□□□ -0.44
IFT88-202ENST00000351808 MRGPREQ86SM8 312 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms