RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 NXNL2Q5VZ03 156 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 APOOLQ6UXV4 268 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 THSD4Q6ZMP0 1018 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ASCL5Q7RTU5 278 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ATG4DQ86TL0 474 aaPredicted RBP6.35□□□□□ -1.39
TRIM55-203ENST00000350034 SLCO6A1Q86UG4 719 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 BPHLQ86WA6 291 aaPredicted RBP6.35□□□□□ -1.39
TRIM55-203ENST00000350034 CDK20Q8IZL9 346 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 EID2Q8N6I1 236 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF614Q8N883 585 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM105Q8N8V8 129 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 DTWD2Q8NBA8 298 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 SLC38A9Q8NBW4 561 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF485Q8NCK3 441 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ZBTB44Q8NCP5 570 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 NFAM1Q8NET5 270 aaPredicted RBP6.35□□□□□ -1.39
TRIM55-203ENST00000350034 OR1N1Q8NGS0 311 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 OR13C2Q8NGS9 318 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 NDNFQ8TB73 568 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 STT3BQ8TCJ2 826 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 GRHL3Q8TE85 626 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 DNAJA4Q8WW22 397 aaPredicted RBP6.35□□□□□ -1.39
TRIM55-203ENST00000350034 LIPHQ8WWY8 451 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 C3orf49Q96BT1 292 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ARSGQ96EG1 525 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 HSPBAP1Q96EW2 488 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 CCDC74BQ96LY2 380 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 MGLLQ99685 303 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF649Q9BS31 505 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 TEX12Q9BXU0 123 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 SLC19A3Q9BZV2 496 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 SEMA4CQ9C0C4 833 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 LAT2Q9GZY6 243 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ENKD1Q9H0I2 346 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 PLGRKTQ9HBL7 147 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 MCCC2Q9HCC0 563 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ISYNA1Q9NPH2 558 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 HINT3Q9NQE9 182 aaKnown RBP6.35□□□□□ -1.39
TRIM55-203ENST00000350034 CLEC2DQ9UHP7 191 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 OSGIN1Q9UJX0 560 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 MRTO4Q9UKD2 239 aaKnown RBP6.35□□□□□ -1.39
TRIM55-203ENST00000350034 RARRES3Q9UL19 164 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 MKL2Q9ULH7 1088 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 BAIAP2Q9UQB8 552 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ERGIC3Q9Y282 383 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 EXOGQ9Y2C4 368 aaKnown RBP6.35□□□□□ -1.39
TRIM55-203ENST00000350034 GPR52Q9Y2T5 361 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 PMF1-BGLAPU3KQ54 211 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 PTPN13Q12923 2485 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ADAMTS20P59510 1910 aa6.35□□□□□ -1.39
TRIM55-203ENST00000350034 ARID1BQ8NFD5 2236 aaPredicted RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 HELZ2Q9BYK8 2649 aaKnown RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 CACNA1HO95180 2353 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 IGKV1D-42A0A075B6H8 117 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 C2orf92A0A1B0GVN3 265 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM129A0AVI4 362 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM221A6NGB7 291 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 PATE3B3GLJ2 98 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 ALG1L2C9J202 215 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 J3QRE1 110 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 M0R296 226 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 CCRL2O00421 344 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 AIREO43918 545 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 PRKNO60260 465 aaPredicted RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 FOXD2O60548 495 aaPredicted RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 PPM1BO75688 479 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 CER1O95813 267 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 IGHA1P01876 353 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 CYC1P08574 325 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 UBL4AP11441 157 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 FGF5P12034 268 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 FUT1P19526 365 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 ETV5P41161 510 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 MTNR1AP48039 350 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 ETV1P50549 477 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 DUSP3P51452 185 aaPredicted RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 BMXP51813 675 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 CDH11P55287 796 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 TUBA1BP68363 451 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 ZFP36L1Q07352 338 aaKnown RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 TMED1Q13445 227 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 TRA2AQ13595 282 aaKnown RBP eCLIP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 TSTQ16762 297 aaKnown RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 DGUOKQ16854 277 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 ISXQ2M1V0 245 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF829Q3KNS6 432 aaPredicted RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF528Q3MIS6 628 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 PWWP2BQ6NUJ5 590 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 SMARCD3Q6STE5 483 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 PAQR6Q6TCH4 344 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 HSDL2Q6YN16 418 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 DBX2Q6ZNG2 339 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 GDPGP1Q6ZNW5 385 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 LANCL3Q6ZV70 420 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 TUBA1AQ71U36 451 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 OVCH1Q7RTY7 1134 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 NUP54Q7Z3B4 507 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 BMP8AQ7Z5Y6 402 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 ANKRD37Q7Z713 158 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms