RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 MOGAT2Q3SYC2 334 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 CSNK2A3Q8NEV1 391 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 OR5P2Q8WZ92 322 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 CRLF2Q9HC73 371 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 NRIP3Q9NQ35 241 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 DIMT1Q9UNQ2 313 aaKnown RBP12.82□□□□□ -0.36
TRIO-202ENST00000344204 NDUFS4O43181 175 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 HLA-HP01893 362 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 IRF5Q13568 498 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 SLC18B1Q6NT16 456 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 LAS2Q8IYD9 372 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 OR56B1Q8NGI3 324 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 ENY2Q9NPA8 101 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 BTNL2Q9UIR0 455 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 OR5H14A6NHG9 310 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 PHOX2AO14813 284 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 DIRAS3O95661 229 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 LIPCP11150 499 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 SNRPBP14678 240 aaKnown RBP12.82□□□□□ -0.36
TRIO-202ENST00000344204 SRP9P49458 86 aaKnown RBP12.82□□□□□ -0.36
TRIO-202ENST00000344204 OR2T2Q6IF00 324 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 PPTC7Q8NI37 304 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 C4orf36Q96KX1 117 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 CD84Q9UIB8 345 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 LOC105371267A0A1B0GV96 52 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 RAD51DO75771 328 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 CXCR1P25024 350 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 RABGGTBP53611 331 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 CCNJQ5T5M9 372 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 XAF1Q6GPH4 301 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 CCDC190Q86UF4 302 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 ZCCHC10Q8TBK6 192 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 SFT2D1Q8WV19 159 aa12.82□□□□□ -0.36
TRIO-202ENST00000344204 WRAP53Q9BUR4 548 aaKnown RBP12.82□□□□□ -0.36
TRIO-202ENST00000344204 SDHAP31040 664 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 AHRP35869 848 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 SLC8B1Q6J4K2 584 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 ACOT7LQ6ZUV0 252 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 CA5BP1Q8WTZ4 195 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 MYBPHLA2RUH7 354 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 M0R143 59 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 POP4O95707 220 aaKnown RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 OR2G6Q5TZ20 316 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 B3GLCTQ6Y288 498 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 PELI3Q8N2H9 469 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 CLDN19Q8N6F1 224 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 OR10G6Q8NH81 332 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 BORCS7Q96B45 105 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 ADAM19Q9H013 955 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 DUSP21Q9H596 190 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 ZFP37Q9Y6Q3 630 aaPredicted RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 J3QR89 54 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 ANXA7P20073 488 aaKnown RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 RPS12P25398 132 aaKnown RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 LAP3P28838 519 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 PSMD8P48556 350 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 UPP1Q16831 310 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 ARHGAP11BQ3KRB8 267 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 FAM182BQ5T319 152 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 OTOP2Q7RTS6 562 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 POLDIP3Q9BY77 421 aaKnown RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 ATXN7L1Q9ULK2 861 aaPredicted RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 CACNA1GO43497 2377 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 FAM221BA6H8Z2 402 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 SLC16A5O15375 505 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 ARAFP10398 606 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 SLC1A3P43003 542 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 SPOCK1Q08629 439 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 GAB1Q13480 694 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 FKBP1CQ5VVH2 108 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 PRAMEF18Q5VWM3 479 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 TINAGL1Q9GZM7 467 aaPredicted RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 CLEC2DQ9UHP7 191 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 NDRG4Q9ULP0 352 aaKnown RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 GRM6O15303 877 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 ATP5A1P25705 553 aaKnown RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 TGFBR1P36897 503 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 FKBP1AP62942 108 aaKnown RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 GLCCI1Q86VQ1 547 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 CPNE7Q9UBL6 633 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 PCDHGA2Q9Y5H1 932 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 SPTAN1Q13813 2472 aaKnown RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■■■■□ 22.3
TRIO-202ENST00000344204 C17orf113A0A1B0GUU1 675 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 MAKP20794 623 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 FGF7P21781 194 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 FABP6P51161 128 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 FRMPD2BQ6IN97 320 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 MFSD6LQ8IWD5 586 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 HCAR1Q9BXC0 346 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 AMBRA1Q9C0C7 1298 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 SLC25A31Q9H0C2 315 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 ATP1B1P05026 303 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 PCP4P48539 62 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 ZXDBP98169 803 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 KIAA1324Q6UXG2 1013 aaKnown RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 NAGSQ8N159 534 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 APH1BQ8WW43 257 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms