RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 OR52D1Q9H346 318 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 GAREM1Q9H706 876 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 NDUFB11Q9NX14 153 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 MKL2Q9ULH7 1088 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 STUB1Q9UNE7 303 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 U3KQA8 63 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 CACNA1EQ15878 2313 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.11■□□□□ 0.33
HOXA9-201ENST00000343483 SERINC4A6NH21 518 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 WWP2O00308 870 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 POLR1CO15160 346 aaPredicted RBP17.11■□□□□ 0.33
HOXA9-201ENST00000343483 TBX1O43435 398 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 PNLIPP16233 465 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 MYL12AP19105 171 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 ELAVL1Q15717 326 aaKnown RBP17.11■□□□□ 0.33
HOXA9-201ENST00000343483 GDPGP1Q6ZNW5 385 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 SLC22A16Q86VW1 577 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 PARP16Q8N5Y8 322 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 CLDN22Q8N7P3 220 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 ZSCAN1Q8NBB4 408 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 SLC46A1Q96NT5 459 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 GAL3ST4Q96RP7 486 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 NXF5Q9H1B4 397 aaKnown RBP17.11■□□□□ 0.33
HOXA9-201ENST00000343483 CTSFQ9UBX1 484 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 CARD8Q9Y2G2 431 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 ARID1BQ8NFD5 2236 aaPredicted RBP17.11■□□□□ 0.33
HOXA9-201ENST00000343483 TCRBV16S1A1N1A0A5B0 115 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 IRGMA1A4Y4 181 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 TOX3O15405 576 aaPredicted RBP17.11■□□□□ 0.33
HOXA9-201ENST00000343483 DDAH2O95865 285 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 ZGLP1P0C6A0 271 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 CRYBB2P43320 205 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 CCL7P80098 99 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 RAB40BQ12829 278 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 ZNF181Q2M3W8 571 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 C3orf38Q5JPI3 329 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 YOD1Q5VVQ6 348 aaPredicted RBP17.11■□□□□ 0.33
HOXA9-201ENST00000343483 LIPKQ5VXJ0 399 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 LAPTM4BQ86VI4 370 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 LYSMD2Q8IV50 215 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 CMIPQ8IY22 773 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 GATSQ8NAP1 163 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 OR52L1Q8NGH7 329 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 OR13C2Q8NGS9 318 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 OR2I1PQ8NGU4 316 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 BRIX1Q8TDN6 353 aaKnown RBP17.11■□□□□ 0.33
HOXA9-201ENST00000343483 HS6ST2Q96MM7 605 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 KCNS3Q9BQ31 491 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 VN1R1Q9GZP7 353 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 UBQLN3Q9H347 655 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 MEPEQ9NQ76 525 aaPredicted RBP17.11■□□□□ 0.33
HOXA9-201ENST00000343483 CHCHD3Q9NX63 227 aaKnown RBP17.11■□□□□ 0.33
HOXA9-201ENST00000343483 RPS6KB2Q9UBS0 482 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 TMEM5Q9Y2B1 443 aa17.11■□□□□ 0.33
HOXA9-201ENST00000343483 RP1P56715 2156 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 A0A1W2PQM1 296 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 GNB5O14775 395 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 RFPL3O75679 317 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 SLC2A10O95528 541 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 HPGDP15428 266 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 PPICP45877 212 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 GAS1P54826 345 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 ZSWIM7Q19AV6 140 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 KIRREL2Q6UWL6 708 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 SHISA6Q6ZSJ9 500 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 PHC2Q8IXK0 858 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 EID2Q8N6I1 236 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 LSMEM1Q8N8F7 131 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 ZNF721Q8TF20 911 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 NEURL2Q9BR09 285 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 MRPS18AQ9NVS2 196 aaKnown RBP17.1■□□□□ 0.33
HOXA9-201ENST00000343483 QPCTLQ9NXS2 382 aa17.1■□□□□ 0.33
HOXA9-201ENST00000343483 ISPDA4D126 451 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 KDM4EB2RXH2 506 aaPredicted RBP17.09■□□□□ 0.33
HOXA9-201ENST00000343483 IGKV3-11P04433 115 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 BMP7P18075 431 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 MTNR1AP48039 350 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 FXYD6P3P58550 94 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 SMARCD3Q6STE5 483 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 TMPRSS11FQ6ZWK6 438 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 OTULINQ96BN8 352 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 OR6C1Q96RD1 312 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 FGF20Q9NP95 211 aaPredicted RBP17.09■□□□□ 0.33
HOXA9-201ENST00000343483 MKKSQ9NPJ1 570 aaPredicted RBP17.09■□□□□ 0.33
HOXA9-201ENST00000343483 SSR3Q9UNL2 185 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 SRPK3Q9UPE1 567 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 HMGN1P05114 100 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 SP9P0CG40 484 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 RPS19P39019 145 aaKnown RBP17.09■□□□□ 0.33
HOXA9-201ENST00000343483 CD97P48960 835 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 CDH11P55287 796 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 FOXL2P58012 376 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 KLHL26Q53HC5 615 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 ULK3Q6PHR2 472 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 PRR22Q8IZ63 422 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 ZNF527Q8NB42 609 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 SLC35B4Q969S0 331 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 TRMT61AQ96FX7 289 aaKnown RBP17.09■□□□□ 0.33
HOXA9-201ENST00000343483 LCORQ96JN0 433 aaPredicted RBP17.09■□□□□ 0.33
HOXA9-201ENST00000343483 NUDT9Q9BW91 350 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms