RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 CSNK1A1LQ8N752 337 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 LGALS14Q8TCE9 139 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 SEC22CQ9BRL7 303 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 TREM1Q9NP99 234 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 SPHK1Q9NYA1 384 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 GSKIPQ9P0R6 139 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 SCDO00767 359 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 PRICKLE3O43900 615 aaPredicted RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 MAKP20794 623 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 GDNFP39905 211 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 MLLT3P42568 568 aaPredicted RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 RPS27P42677 84 aaKnown RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 MRPL19P49406 292 aaKnown RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 ART1P52961 327 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 E2F1Q01094 437 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 ZXDCQ2QGD7 858 aaPredicted RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF322Q6U7Q0 402 aaPredicted RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 ELP4Q96EB1 424 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 TRMT61AQ96FX7 289 aaKnown RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 ZMAT3Q9HA38 289 aaKnown RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 MBNL1Q9NR56 388 aaKnown RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 RXFP3Q9NSD7 469 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 KLHL9Q9P2J3 617 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 FLVCR2Q9UPI3 526 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 TRDV1A0A1B0GX56 115 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 FFAR1O14842 300 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 LGI1O95970 557 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 PGAM2P15259 253 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 GZMKP49863 264 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 RPS21P63220 83 aaKnown RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 DGCR2P98153 550 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 ARFRP1Q13795 201 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 OCLNQ16625 522 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF615Q8N8J6 731 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF511Q8NB15 262 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 SYNPRQ8TBG9 265 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC6A7Q99884 636 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 CLDND1Q9NY35 253 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 NAALAD2Q9Y3Q0 740 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 RTTNQ86VV8 2226 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 AHCTF1Q8WYP5 2266 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 F5H0A9 414 aaPredicted RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 NDUFS1P28331 727 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 HOXD11P31277 338 aaPredicted RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 EVX1P49640 407 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 VASPP50552 380 aaPredicted RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 KIAA1024LP59773 190 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 UBE2MP61081 183 aaKnown RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 ELOAQ14241 798 aaKnown RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 IRF4Q15306 451 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC22A10Q63ZE4 541 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 HBMQ6B0K9 141 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 INO80EQ8NBZ0 244 aaPredicted RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 NMNAT3Q96T66 252 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 NOX3Q9HBY0 568 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 GPATCH2Q9NW75 528 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 COPS3Q9UNS2 423 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 LRIT2A6NDA9 550 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 GOSR2O14653 212 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 PTHLHP12272 177 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 CFL1P23528 166 aaKnown RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 ITPRIPL2Q3MIP1 535 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 ARHGAP11AQ6P4F7 1023 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 KLHL24Q6TFL4 600 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 ST6GAL2Q96JF0 529 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 DDOQ99489 341 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 NUBP2Q9Y5Y2 271 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 AP1M2Q9Y6Q5 423 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 A0A0A6YYC8 382 aaPredicted RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 EEF1E1-BLOC1S5C9J1V9 151 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 I3L1I5 382 aaPredicted RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 SCO2O43819 266 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 NDUFB2O95178 105 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 PDGFAP04085 211 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 HOXB3P14651 431 aaPredicted RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 MAOBP27338 520 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 FOXK2Q01167 660 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 GPR50Q13585 617 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 EFR3AQ14156 821 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 ATCAYQ86WG3 371 aa11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.57□□□□□ -0.56
SNRNP48-201ENST00000342415 A0A1B0GVI7 797 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 A0A1W2PS29 197 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 CDC14CA4D256 554 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF780AO75290 641 aaPredicted RBP11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 S100A6P06703 90 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 CPMP14384 443 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 CPEP16870 476 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 PRMT2P55345 433 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 RUNX3Q13761 415 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 FGL2Q14314 439 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 AGERQ15109 404 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 Q6ZNB5 142 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 BTN2A1Q7KYR7 527 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC35F2Q8IXU6 374 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 LAS2Q8IYD9 372 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 NR4A3Q92570 626 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 RAB7BQ96AH8 199 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 CNRIP1Q96F85 164 aaPredicted RBP11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 GLTPQ9NZD2 209 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms