RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ILF3Q12906 894 aaKnown RBP eCLIP13.45□□□□□ -0.26
TDP2-201ENST00000341060 GLCCI1Q86VQ1 547 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 TPRA1Q86W33 373 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 GRAMD2AQ8IUY3 354 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 TCTE3Q8IZS6 198 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 OR51A7Q8NH64 312 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 OR4C6Q8NH72 309 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 GRHL3Q8TE85 626 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 ANKRD9Q96BM1 317 aaPredicted RBP13.45□□□□□ -0.26
TDP2-201ENST00000341060 MARVELD1Q9BSK0 173 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 OR51V1Q9H2C8 321 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 CYSLTR2Q9NS75 346 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 WDR70Q9NW82 654 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 HAO2Q9NYQ3 351 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 FLRT3Q9NZU0 649 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 CPNE7Q9UBL6 633 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 KLHL21Q9UJP4 597 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 BRWD1Q9NSI6 2320 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 A0A0G2JMP0 313 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 A0A0X1KG70 313 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 E9PI62 339 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 SOX30O94993 753 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 CBX7O95931 251 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 MRPL3P09001 348 aaKnown RBP13.44□□□□□ -0.26
TDP2-201ENST00000341060 CAPZA2P47755 286 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 INPP1P49441 399 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 CD83Q01151 205 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 CRMP1Q14194 572 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 TIGD3Q6B0B8 471 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 ARL9Q6T311 187 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 VASH1Q7L8A9 365 aaPredicted RBP13.44□□□□□ -0.26
TDP2-201ENST00000341060 CSNK1A1LQ8N752 337 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 OR4M2Q8NGB6 313 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 SLC2A12Q8TD20 617 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 CNOT9Q92600 299 aaKnown RBP13.44□□□□□ -0.26
TDP2-201ENST00000341060 ARSGQ96EG1 525 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 C4orf36Q96KX1 117 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 BEX2Q9BXY8 128 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 ERVMER34-1Q9H9K5 563 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 ALG5Q9Y673 324 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 CLCA3PQ9Y6N3 262 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 MPDZO75970 2070 aa13.44□□□□□ -0.26
TDP2-201ENST00000341060 A0A1B0GWA3 101 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 PPP1R3DO95685 299 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 CLUP10909 449 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 SHC1P29353 583 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 RBMS1P29558 406 aaKnown RBP13.43□□□□□ -0.26
TDP2-201ENST00000341060 RBM34P42696 430 aaKnown RBP13.43□□□□□ -0.26
TDP2-201ENST00000341060 RAB38P57729 211 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 PSG6Q00889 435 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 ZNF85Q03923 595 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 POU4F2Q12837 409 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 FCRLBQ6BAA4 426 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 SFXN4Q6P4A7 337 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 KIAA1324Q6UXG2 1013 aaKnown RBP13.43□□□□□ -0.26
TDP2-201ENST00000341060 PAMR1Q6UXH9 720 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 PXKQ7Z7A4 578 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 OAFQ86UD1 273 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 SLC43A2Q8N370 569 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 OR52R1Q8NGF1 315 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 PGLYRP3Q96LB9 341 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 TMEM246Q9BRR3 403 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 PRO3102Q9H379 93 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 TRPV5Q9NQA5 729 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 HRASLS2Q9NWW9 162 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 USP36Q9P275 1121 aaKnown RBP13.43□□□□□ -0.26
TDP2-201ENST00000341060 EML5Q05BV3 1969 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 TMEM131Q92545 1883 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 TTC36A6NLP5 189 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 SCO2O43819 266 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 ADAM11O75078 769 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 SLC43A1O75387 559 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 NGFRP08138 427 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 GUSBP08236 651 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 SLC35E2P0CK97 266 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 PEPDP12955 493 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 HK1P19367 917 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 TALDO1P37837 337 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 ACAA2P42765 397 aaKnown RBP13.43□□□□□ -0.26
TDP2-201ENST00000341060 RFX3P48380 749 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 TPMTP51580 245 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 UBE2IP63279 158 aaKnown RBP13.43□□□□□ -0.26
TDP2-201ENST00000341060 ACTC1P68032 377 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 ACTA1P68133 377 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 E2F1Q01094 437 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 FHL1Q13642 323 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 FAM27D1Q5T7N8 215 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 ARHGAP11AQ6P4F7 1023 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 DGAT2L6Q6ZPD8 337 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 RTL4Q6ZR62 310 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 LSMEM1Q8N8F7 131 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 CYB561A3Q8NBI2 242 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 C17orf47Q8NEP4 570 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 LILRB4Q8NHJ6 448 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 SMPDL3BQ92485 455 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 ENAMQ9NRM1 1142 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 PLSCR3Q9NRY6 295 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 DNAJB12Q9NXW2 375 aaKnown RBP13.43□□□□□ -0.26
TDP2-201ENST00000341060 FBXL4Q9UKA2 621 aa13.43□□□□□ -0.26
TDP2-201ENST00000341060 AGRPO00253 132 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms