RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 STX1BP61266 288 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 FUT5Q11128 374 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 GNA13Q14344 377 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 QPRTQ15274 297 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 RNPS1Q15287 305 aaKnown RBP11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 GPAT3Q53EU6 434 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 C3orf33Q6P1S2 294 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 VWA1Q6PCB0 445 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 FRRS1Q6ZNA5 592 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 LRRC74BQ6ZQY2 392 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 BTLAQ7Z6A9 289 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 C10orf67Q8IYJ2 551 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 STON2Q8WXE9 905 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 OSTF1Q92882 214 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 RAB8BQ92930 207 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 OR52B2Q96RD2 323 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 TACO1Q9BSH4 297 aaKnown RBP11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 TCF7L2Q9NQB0 619 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 SERINC1Q9NRX5 453 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 KCNE5Q9UJ90 142 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 FAM234BA2RU67 622 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 SH3D21A4FU49 640 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 NDUFAB1O14561 156 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 OIP5O43482 229 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 CXCL13O43927 109 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 H6PDO95479 791 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 ANP32DO95626 131 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 UBTFL6P0CB48 400 aaPredicted RBP11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 SLC7A1P30825 629 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 SFTPDP35247 375 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 PGM1P36871 562 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 CDKN2CP42773 168 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 CASP9P55211 416 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 SIRPAP78324 504 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 SNTB1Q13884 538 aaKnown RBP11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 ZNF239Q16600 458 aaKnown RBP11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 PPP4R4Q6NUP7 873 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 C6orf89Q6UWU4 347 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 STK32CQ86UX6 486 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 RFWD2Q8NHY2 731 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 ZFP90Q8TF47 636 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 SLC25A43Q8WUT9 341 aaPredicted RBP11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 NPAS1Q99742 590 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 GPATCH1Q9BRR8 931 aaKnown RBP11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 INPP5KQ9BT40 448 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 CCDC28BQ9BUN5 200 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 THUMPD3Q9BV44 507 aaKnown RBP11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 TMEM185BQ9H7F4 350 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 MTHFD2LQ9H903 347 aaPredicted RBP11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 PLSCR4Q9NRQ2 329 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 INTS9Q9NV88 658 aaKnown RBP11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 CALML5Q9NZT1 146 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 P2RX2Q9UBL9 471 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 TESMINQ9Y4I5 508 aa11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 SPIN1Q9Y657 262 aaPredicted RBP11.94□□□□□ -0.5
SIRPB3P-201ENST00000340424 CCDC168Q8NDH2 2452 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 TMEM247A6NEH6 219 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 AGAP5A6NIR3 686 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 C9JVG2 144 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 CASKO14936 926 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 CYP7B1O75881 506 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 DBIP07108 87 aaKnown RBP11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 NR2F1P10589 423 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 POU2F1P14859 743 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 UQCRBP14927 111 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 PPP3CBP16298 524 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 APOBEC1P41238 236 aaKnown RBP11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 KCNJ5P48544 419 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 PPP2R2AP63151 447 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 KCNJ10P78508 379 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 TOMM34Q15785 309 aaPredicted RBP11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 MAPK14Q16539 360 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 ZSWIM7Q19AV6 140 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 NDUFAF6Q330K2 333 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 TMEM176BQ3YBM2 270 aaPredicted RBP11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 TIGD2Q4W5G0 525 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 FBXW10Q5XX13 1052 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 ZNF474Q6S9Z5 364 aaPredicted RBP11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 SLC43A2Q8N370 569 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 LINC01560Q8TB33 94 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 RNF128Q8TEB7 428 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 MARK4Q96L34 752 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 KLHDC3Q9BQ90 382 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 OPN3Q9H1Y3 402 aaPredicted RBP11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 RAD21L1Q9H4I0 556 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 ACER3Q9NUN7 267 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 ZNF226Q9NYT6 803 aa11.93□□□□□ -0.5
SIRPB3P-201ENST00000340424 CELSR1Q9NYQ6 3014 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 CENPVL1A0A0U1RR11 272 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 PRAMEF27A3QJZ7 478 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 C16orf97H3BN30 126 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 FAAHO00519 579 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 GSNP06396 782 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 NID1P14543 1247 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 RPS4Y1P22090 263 aaKnown RBP11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 AGTR1P30556 359 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 DNAJA1P31689 397 aaKnown RBP11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 UGT2B10P36537 528 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 HTR3AP46098 478 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms