RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 DUSP22Q9NRW4 184 aa15.07■□□□□ 0
LITAF-201ENST00000339430 A0A1B0GVT2 93 aa15.06■□□□□ 0
LITAF-201ENST00000339430 J3QRE1 110 aa15.06■□□□□ 0
LITAF-201ENST00000339430 PLOD3O60568 738 aa15.06■□□□□ 0
LITAF-201ENST00000339430 SDC3O75056 442 aa15.06■□□□□ 0
LITAF-201ENST00000339430 RDH16O75452 317 aa15.06■□□□□ 0
LITAF-201ENST00000339430 RFPL3O75679 317 aa15.06■□□□□ 0
LITAF-201ENST00000339430 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
LITAF-201ENST00000339430 POU6F2P78424 691 aaPredicted RBP15.06■□□□□ 0
LITAF-201ENST00000339430 MGAT2Q10469 447 aa15.06■□□□□ 0
LITAF-201ENST00000339430 PMS2CLQ68D20 193 aa15.06■□□□□ 0
LITAF-201ENST00000339430 TMEM53Q6P2H8 277 aa15.06■□□□□ 0
LITAF-201ENST00000339430 MEPCEQ7L2J0 689 aaKnown RBP15.06■□□□□ 0
LITAF-201ENST00000339430 SLC7A5P1Q8MH63 180 aa15.06■□□□□ 0
LITAF-201ENST00000339430 GDPD1Q8N9F7 314 aa15.06■□□□□ 0
LITAF-201ENST00000339430 DNAJA4Q8WW22 397 aaPredicted RBP15.06■□□□□ 0
LITAF-201ENST00000339430 CNOT9Q92600 299 aaKnown RBP15.06■□□□□ 0
LITAF-201ENST00000339430 ZNF486Q96H40 463 aaPredicted RBP15.06■□□□□ 0
LITAF-201ENST00000339430 DDX28Q9NUL7 540 aaKnown RBP15.06■□□□□ 0
LITAF-201ENST00000339430 A0A087WV62 115 aa15.06■□□□□ 0
LITAF-201ENST00000339430 KIR2DS5A0A0G2JLQ3 304 aa15.06■□□□□ 0
LITAF-201ENST00000339430 A0A0G2JNG1 304 aa15.06■□□□□ 0
LITAF-201ENST00000339430 OR5K4A6NMS3 321 aa15.06■□□□□ 0
LITAF-201ENST00000339430 KIR2DS3K7RE56 304 aa15.06■□□□□ 0
LITAF-201ENST00000339430 GALR3O60755 368 aaPredicted RBP15.06■□□□□ 0
LITAF-201ENST00000339430 PPP3R1P63098 170 aa15.06■□□□□ 0
LITAF-201ENST00000339430 ASAH1Q13510 395 aa15.06■□□□□ 0
LITAF-201ENST00000339430 IL18Q14116 193 aa15.06■□□□□ 0
LITAF-201ENST00000339430 KIR2DS5Q14953 304 aa15.06■□□□□ 0
LITAF-201ENST00000339430 GID4Q8IVV7 300 aa15.06■□□□□ 0
LITAF-201ENST00000339430 ACBD7Q8N6N7 88 aa15.06■□□□□ 0
LITAF-201ENST00000339430 CYB561A3Q8NBI2 242 aa15.06■□□□□ 0
LITAF-201ENST00000339430 OR52R1Q8NGF1 315 aa15.06■□□□□ 0
LITAF-201ENST00000339430 SENP5Q96HI0 755 aaPredicted RBP15.06■□□□□ 0
LITAF-201ENST00000339430 CTRCQ99895 268 aa15.06■□□□□ 0
LITAF-201ENST00000339430 CCDC3Q9BQI4 270 aa15.06■□□□□ 0
LITAF-201ENST00000339430 MEPEQ9NQ76 525 aaPredicted RBP15.06■□□□□ 0
LITAF-201ENST00000339430 POT1Q9NUX5 634 aa15.06■□□□□ 0
LITAF-201ENST00000339430 SATB2Q9UPW6 733 aa15.06■□□□□ 0
LITAF-201ENST00000339430 A0A0J9YY10 115 aa15.05■□□□□ 0
LITAF-201ENST00000339430 CCDC182A6NF36 153 aa15.05■□□□□ 0
LITAF-201ENST00000339430 PLA2G10O15496 165 aa15.05■□□□□ 0
LITAF-201ENST00000339430 RNF13O43567 381 aa15.05■□□□□ 0
LITAF-201ENST00000339430 BRINP1O60477 761 aa15.05■□□□□ 0
LITAF-201ENST00000339430 NOS3P29474 1203 aa15.05■□□□□ 0
LITAF-201ENST00000339430 HNRNPKP61978 463 aaKnown RBP eCLIP15.05■□□□□ 06e-8■□□□□ 11.1
LITAF-201ENST00000339430 UBE2IP63279 158 aaKnown RBP15.05■□□□□ 0
LITAF-201ENST00000339430 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.05■□□□□ 0
LITAF-201ENST00000339430 GLCCI1Q86VQ1 547 aa15.05■□□□□ 0
LITAF-201ENST00000339430 SLC37A3Q8NCC5 494 aa15.05■□□□□ 0
LITAF-201ENST00000339430 OR4N2Q8NGD1 307 aa15.05■□□□□ 0
LITAF-201ENST00000339430 OR9A4Q8NGU2 314 aa15.05■□□□□ 0
LITAF-201ENST00000339430 PTP4A1Q93096 173 aa15.05■□□□□ 0
LITAF-201ENST00000339430 ANKRD9Q96BM1 317 aaPredicted RBP15.05■□□□□ 0
LITAF-201ENST00000339430 TIMP4Q99727 224 aa15.05■□□□□ 0
LITAF-201ENST00000339430 RNF32Q9H0A6 362 aa15.05■□□□□ 0
LITAF-201ENST00000339430 FAM60AQ9NP50 221 aa15.05■□□□□ 0
LITAF-201ENST00000339430 FBXL4Q9UKA2 621 aa15.05■□□□□ 0
LITAF-201ENST00000339430 DAPL1A0PJW8 107 aa15.05■□□□□ -0
LITAF-201ENST00000339430 GYPBP06028 91 aa15.05■□□□□ -0
LITAF-201ENST00000339430 SLC2A2P11168 524 aaPredicted RBP15.05■□□□□ -0
LITAF-201ENST00000339430 EMDP50402 254 aa15.05■□□□□ -0
LITAF-201ENST00000339430 FOXK2Q01167 660 aa15.05■□□□□ -0
LITAF-201ENST00000339430 ACSM1Q08AH1 577 aa15.05■□□□□ -0
LITAF-201ENST00000339430 AMZ1Q400G9 498 aa15.05■□□□□ -0
LITAF-201ENST00000339430 EXOSC6Q5RKV6 272 aaKnown RBP15.05■□□□□ -0
LITAF-201ENST00000339430 BMP8AQ7Z5Y6 402 aa15.05■□□□□ -0
LITAF-201ENST00000339430 GKN2Q86XP6 184 aa15.05■□□□□ -0
LITAF-201ENST00000339430 CDK20Q8IZL9 346 aa15.05■□□□□ -0
LITAF-201ENST00000339430 Q8N402 240 aa15.05■□□□□ -0
LITAF-201ENST00000339430 ZNF655Q8N720 491 aaPredicted RBP15.05■□□□□ -0
LITAF-201ENST00000339430 STACQ99469 402 aa15.05■□□□□ -0
LITAF-201ENST00000339430 TWSG1Q9GZX9 223 aa15.05■□□□□ -0
LITAF-201ENST00000339430 TP63Q9H3D4 680 aaPredicted RBP15.05■□□□□ -0
LITAF-201ENST00000339430 NPAP1Q9NZP6 1156 aa15.05■□□□□ -0
LITAF-201ENST00000339430 MED31Q9Y3C7 131 aa15.05■□□□□ -0
LITAF-201ENST00000339430 N6AMT1Q9Y5N5 214 aa15.05■□□□□ -0
LITAF-201ENST00000339430 PRR23D1E9PI22 279 aaPredicted RBP15.04■□□□□ -0
LITAF-201ENST00000339430 GTPBP1O00178 669 aaKnown RBP15.04■□□□□ -0
LITAF-201ENST00000339430 GNB5O14775 395 aa15.04■□□□□ -0
LITAF-201ENST00000339430 OR10H2O60403 315 aa15.04■□□□□ -0
LITAF-201ENST00000339430 ADAM11O75078 769 aa15.04■□□□□ -0
LITAF-201ENST00000339430 CDC123O75794 336 aaPredicted RBP15.04■□□□□ -0
LITAF-201ENST00000339430 CBX7O95931 251 aa15.04■□□□□ -0
LITAF-201ENST00000339430 PRR23D2P0DMB1 279 aaPredicted RBP15.04■□□□□ -0
LITAF-201ENST00000339430 KIR2DL3P43628 341 aa15.04■□□□□ -0
LITAF-201ENST00000339430 IFITM2Q01629 132 aa15.04■□□□□ -0
LITAF-201ENST00000339430 TBRG1Q3YBR2 411 aa15.04■□□□□ -0
LITAF-201ENST00000339430 RNF44Q7L0R7 432 aa15.04■□□□□ -0
LITAF-201ENST00000339430 RNF113BQ8IZP6 322 aaKnown RBP15.04■□□□□ -0
LITAF-201ENST00000339430 LNX2Q8N448 690 aa15.04■□□□□ -0
LITAF-201ENST00000339430 DTX3Q8N9I9 347 aa15.04■□□□□ -0
LITAF-201ENST00000339430 RSC1A1Q92681 617 aa15.04■□□□□ -0
LITAF-201ENST00000339430 KISS1RQ969F8 398 aaPredicted RBP15.04■□□□□ -0
LITAF-201ENST00000339430 TTTY10Q9BZA0 68 aa15.04■□□□□ -0
LITAF-201ENST00000339430 B3GAT2Q9NPZ5 323 aa15.04■□□□□ -0
LITAF-201ENST00000339430 UCKL1Q9NWZ5 548 aa15.04■□□□□ -0
LITAF-201ENST00000339430 BABAM2Q9NXR7 383 aa15.04■□□□□ -0
LITAF-201ENST00000339430 FLRT3Q9NZU0 649 aa15.04■□□□□ -0
LITAF-201ENST00000339430 SIGLEC7Q9Y286 467 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms