RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 RDH8Q9NYR8 311 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 USP36Q9P275 1121 aaKnown RBP17.41■□□□□ 0.38
PSPC1-201ENST00000338910 SCP2D1Q9UJQ7 156 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 PCOLCE2Q9UKZ9 415 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 EXOGQ9Y2C4 368 aaKnown RBP17.41■□□□□ 0.38
PSPC1-201ENST00000338910 G3V3Q6 166 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 SOX30O94993 753 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 SRFP11831 508 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 ICAM2P13598 275 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 F3P13726 295 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 GIFP27352 417 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 AKT2P31751 481 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 RIPPLY1Q0D2K3 151 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 MAP4K2Q12851 820 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 MLC1Q15049 377 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 ZNF542PQ5EBM4 170 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 ZNF322Q6U7Q0 402 aaPredicted RBP17.4■□□□□ 0.38
PSPC1-201ENST00000338910 ARSKQ6UWY0 536 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 PAQR7Q86WK9 346 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 NRROSQ86YC3 692 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 PRRC1Q96M27 445 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 CTPS2Q9NRF8 586 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 PTGFRNQ9P2B2 879 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 LIPT1Q9Y234 373 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 SCN3AQ9NY46 2000 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 SERPINI2O75830 405 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 IGHV4-34P06331 123 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 CRYZQ08257 329 aaKnown RBP17.4■□□□□ 0.38
PSPC1-201ENST00000338910 PYHIN1Q6K0P9 492 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 FBXO42Q6P3S6 717 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 SMARCD3Q6STE5 483 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 VN1R4Q7Z5H5 301 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 HMGN2P46Q86SG4 172 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 SFTPA2Q8IWL1 248 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 OR13H1Q8NG92 308 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 SLC35G5Q96KT7 338 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 POLMQ9NP87 494 aaPredicted RBP17.4■□□□□ 0.38
PSPC1-201ENST00000338910 COPZ2Q9P299 210 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 TNFRSF10DQ9UBN6 386 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 SLC9A8Q9Y2E8 581 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 NPTNQ9Y639 398 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 MYO15AQ9UKN7 3530 aa17.4■□□□□ 0.38
PSPC1-201ENST00000338910 A0A087WUU8 490 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 RNF13O43567 381 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 PPM1BO75688 479 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 ACSM4P0C7M7 580 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 PEPDP12955 493 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 ZP3P21754 424 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 RAG2P55895 527 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 VSX2P58304 361 aaPredicted RBP17.39■□□□□ 0.37
PSPC1-201ENST00000338910 STXBP1P61764 594 aaKnown RBP17.39■□□□□ 0.37
PSPC1-201ENST00000338910 TDGQ13569 410 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 CLEC12AQ5QGZ9 265 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 ZBTB44Q8NCP5 570 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 SRFBP1Q8NEF9 429 aaKnown RBP17.39■□□□□ 0.37
PSPC1-201ENST00000338910 SUN3Q8TAQ9 357 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 CACNG6Q9BXT2 260 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 RBCK1Q9BYM8 510 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 RASD1Q9Y272 281 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 GSAPA4D1B5 854 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 A6NCN8 305 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 TUBAL3A6NHL2 446 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 TNFRSF10CO14798 259 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 NR2F1P10589 423 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 SHC2P98077 582 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 GPR18Q14330 331 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 FGD2Q7Z6J4 655 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 ZNF687Q8N1G0 1237 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 OR2T4Q8NH00 348 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 TCEAL2Q9H3H9 227 aaPredicted RBP17.39■□□□□ 0.37
PSPC1-201ENST00000338910 KCNMB2Q9Y691 235 aa17.39■□□□□ 0.37
PSPC1-201ENST00000338910 OR6C74A6NCV1 312 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 ZNF888P0CJ79 500 aaPredicted RBP17.38■□□□□ 0.37
PSPC1-201ENST00000338910 ZP1P60852 638 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 DBPQ10586 325 aaPredicted RBP17.38■□□□□ 0.37
PSPC1-201ENST00000338910 BHLHB9Q6PI77 547 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 RASSF6Q6ZTQ3 369 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 SIAH3Q8IW03 269 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 SLC22A18ASQ8N1D0 253 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 BEST4Q8NFU0 473 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 GNPDA2Q8TDQ7 276 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 GIMAP1Q8WWP7 306 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 YIPF5Q969M3 257 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 SLC22A18Q96BI1 424 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 SLC2A4RGQ9NR83 387 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 P2RX2Q9UBL9 471 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 KIF25Q9UIL4 384 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 CA14Q9ULX7 337 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 TMEM5Q9Y2B1 443 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 SIRT4Q9Y6E7 314 aaPredicted RBP17.38■□□□□ 0.37
PSPC1-201ENST00000338910 hCG_1807616A0A1W2PRN6 198 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 M0R233 179 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 TOR1AO14656 332 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 CH25HO95992 272 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 SHC1P29353 583 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 RNF144AP50876 292 aaPredicted RBP17.38■□□□□ 0.37
PSPC1-201ENST00000338910 YPEL5P62699 121 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 BDH1Q02338 343 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 TSPAN31Q12999 210 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 LASP1Q14847 261 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms