RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 MAKP20794 623 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 ZNF117Q03924 483 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 BTBD16Q32M84 506 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 TMEM201Q5SNT2 666 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 TMEM164Q5U3C3 297 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 ACSM5Q6NUN0 579 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 SLC27A4Q6P1M0 643 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 PTCHD4Q6ZW05 846 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 SPARTQ8N0X7 666 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 OR11G2Q8NGC1 345 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 OR8J1Q8NGP2 316 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 M1APQ8TC57 530 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 IPCEF1Q8WWN9 437 aaPredicted RBP14.14□□□□□ -0.15
LIMS1-202ENST00000338045 OSTF1Q92882 214 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 SIGLEC11Q96RL6 698 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 NODALQ96S42 347 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 PHOX2BQ99453 314 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 POLDIP3Q9BY77 421 aaKnown RBP14.14□□□□□ -0.15
LIMS1-202ENST00000338045 IRF2BPLQ9H1B7 796 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 MMP25Q9NPA2 562 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 CCNB1IP1Q9NPC3 277 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 ATP13A2Q9NQ11 1180 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 FAM86C1Q9NVL1 165 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 SELENONQ9NZV5 590 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 FOXJ2Q9P0K8 574 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 TCFL5Q9UL49 500 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 ICAM5Q9UMF0 924 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 PCDHGB1Q9Y5G3 927 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 CDH10Q9Y6N8 788 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 CFAP54Q96N23 3096 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 EXPH5Q8NEV8 1989 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 SH3D21A4FU49 640 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 FAM20BO75063 409 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 JUNBP17275 347 aaPredicted RBP14.14□□□□□ -0.15
LIMS1-202ENST00000338045 TCN2P20062 427 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 PTNP21246 168 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 MST1P26927 711 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 CASP12Q6UXS9 341 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 KCTD8Q6ZWB6 473 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 CDK20Q8IZL9 346 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 IQCF1Q8N6M8 205 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 ZNF540Q8NDQ6 660 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 B4GALNT2Q8NHY0 566 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 TTC9Q92623 222 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 FGF11Q92914 225 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 DTNBP1Q96EV8 351 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 DEFB126Q9BYW3 111 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 DPH1Q9BZG8 443 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 RBM38Q9H0Z9 239 aaKnown RBP14.14□□□□□ -0.15
LIMS1-202ENST00000338045 FKBP14Q9NWM8 211 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 PSORS1C1Q9UIG5 152 aa14.14□□□□□ -0.15
LIMS1-202ENST00000338045 UNC119BA6NIH7 251 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 HCRTR2O43614 444 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 PCYT1AP49585 367 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 FBXW4P57775 412 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 C3orf38Q5JPI3 329 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 SLC25A30Q5SVS4 291 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 XAF1Q6GPH4 301 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 BORAQ6PGQ7 559 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 NUP54Q7Z3B4 507 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 ATG4DQ86TL0 474 aaPredicted RBP14.13□□□□□ -0.15
LIMS1-202ENST00000338045 MISPQ8IVT2 679 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 SLC15A4Q8N697 577 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 TMCO5AQ8N6Q1 288 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 DEFB124Q8NES8 71 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 BRIX1Q8TDN6 353 aaKnown RBP14.13□□□□□ -0.15
LIMS1-202ENST00000338045 ZNF524Q96C55 264 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 TMCO6Q96DC7 493 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 KLHDC3Q9BQ90 382 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 RHNO1Q9BSD3 238 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 SLC19A3Q9BZV2 496 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 B3GNT4Q9C0J1 378 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 C12orf10Q9HB07 376 aa14.13□□□□□ -0.15
LIMS1-202ENST00000338045 KPNA4O00629 521 aaPredicted RBP14.12□□□□□ -0.15
LIMS1-202ENST00000338045 IGF2P01344 180 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 FBXO45P0C2W1 286 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 PNMTP11086 282 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 TMED10P49755 219 aaKnown RBP14.12□□□□□ -0.15
LIMS1-202ENST00000338045 CCR4P51679 360 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 FXYD6P3P58550 94 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 PIGFQ07326 219 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 NDUFAF7Q7L592 441 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 PPP1R32Q7Z5V6 425 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 LSRQ86X29 649 aaPredicted RBP14.12□□□□□ -0.15
LIMS1-202ENST00000338045 FAM26EQ8N5C1 309 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 ESX1Q8N693 406 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 OR5W2Q8NH69 310 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 SLC22A8Q8TCC7 542 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 TMIGD2Q96BF3 282 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 NACC2Q96BF6 587 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 IL4I1Q96RQ9 567 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 TSSK6Q9BXA6 273 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 ADAM19Q9H013 955 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 CLN6Q9NWW5 311 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 TVP23BQ9NYZ1 205 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 ERVK-18Q9QC07 812 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 FARSAQ9Y285 508 aaKnown RBP14.12□□□□□ -0.15
LIMS1-202ENST00000338045 SIGLEC7Q9Y286 467 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 SDK2Q58EX2 2172 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 EP300Q09472 2414 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms