RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SNX11Q9Y5W9 270 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 A0A1B0GTW7 788 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 SEC14L5O43304 696 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 DNAJB6O75190 326 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 MMP2P08253 660 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 IGFBP6P24592 240 aaPredicted RBP12.85□□□□□ -0.35
RTN4-202ENST00000337526 MECP2P51608 486 aaKnown RBP12.85□□□□□ -0.35
RTN4-202ENST00000337526 PER3P56645 1201 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 PFN3P60673 137 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 SLC35A2P78381 396 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 ACVR1Q04771 509 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 RSU1Q15404 277 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 PM20D2Q8IYS1 436 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 NEURL3Q96EH8 262 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 KLF15Q9UIH9 416 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 HHLA2Q9UM44 414 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 ICKQ9UPZ9 632 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 VDAC3Q9Y277 283 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 SLC6A5Q9Y345 797 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 METTL15A6NJ78 407 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 SLC16A7O60669 478 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 TUBG1P23258 451 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 CCSMST1Q4G0I0 132 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 ZNF765Q7L2R6 523 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 CELF2-AS1Q8N7Q2 184 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 DDIT4LQ96D03 193 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 MKRN2Q9H000 416 aaKnown RBP12.85□□□□□ -0.35
RTN4-202ENST00000337526 SAV1Q9H4B6 383 aaPredicted RBP12.85□□□□□ -0.35
RTN4-202ENST00000337526 TMEM38AQ9H6F2 299 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 MED20Q9H944 212 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 TMEM30AQ9NV96 361 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 ZNF337Q9Y3M9 751 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 A0A0A6YYH2 397 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 KIR2DS5A0A0G2JLQ3 304 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 A0A0G2JNG1 304 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 A0A1B0GV50 99 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 A6NJ64 397 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 KIR2DS3K7RE56 304 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 SLCO2B1O94956 709 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 NPPBP16860 134 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 ELAVL4P26378 380 aaKnown RBP12.85□□□□□ -0.35
RTN4-202ENST00000337526 SNU13P55769 128 aaKnown RBP12.85□□□□□ -0.35
RTN4-202ENST00000337526 KIR2DS5Q14953 304 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 RNF113BQ8IZP6 322 aaKnown RBP12.85□□□□□ -0.35
RTN4-202ENST00000337526 OR56B4Q8NH76 319 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 NPRL2Q8WTW4 380 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 TOMM40LQ969M1 308 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 RBM24Q9BX46 236 aaKnown RBP12.85□□□□□ -0.35
RTN4-202ENST00000337526 MS4A8Q9BY19 250 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 P2RY12Q9H244 342 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 SLC9B1P1A6NJY1 282 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 CRTAPO75718 401 aaPredicted RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 THBS2P35442 1172 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 CAMLGP49069 296 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 LINC00299Q6ZSB3 139 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 GPR137CQ8N3F9 429 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 OR6T1Q8NGN1 323 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 SLCO4A1Q96BD0 722 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 ZNF582Q96NG8 517 aaPredicted RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 TMEM121BQ9BXQ6 578 aaPredicted RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 C8orf33Q9H7E9 229 aaPredicted RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 MARCH5Q9NX47 278 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 SIDT1Q9NXL6 827 aaKnown RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 TESQ9UGI8 421 aaKnown RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 DIMT1Q9UNQ2 313 aaKnown RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 OR2A25A4D2G3 310 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 RAB40ALP0C0E4 278 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 SFTPDP35247 375 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 PDE7AQ13946 482 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 GK2Q14410 553 aaPredicted RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 HYAL4Q2M3T9 481 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 TMEM244Q5VVB8 128 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 RPL22L1Q6P5R6 122 aaKnown RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 TSSK4Q6SA08 328 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 LYSMD2Q8IV50 215 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 RAB40AQ8WXH6 277 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 DCUN1D4Q92564 292 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 GHSRQ92847 366 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 ZNF649Q9BS31 505 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 INIPQ9NRY2 104 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 ASF1BQ9NVP2 202 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 ASIC5Q9NY37 505 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 KCNS2Q9ULS6 477 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 A3GALT2U3KPV4 340 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 NUPL2O15504 423 aaKnown RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 F3P13726 295 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 SNRPBP14678 240 aaKnown RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 HLA-DMAP28067 261 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 MMP12P39900 470 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 RPL34P49207 117 aaKnown RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 APOOLQ6UXV4 268 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 BCDIN3DQ7Z5W3 292 aaKnown RBP12.84□□□□□ -0.35
RTN4-202ENST00000337526 OLIG1Q8TAK6 271 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 CHTF18Q8WVB6 975 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 ARL11Q969Q4 196 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 S100PBPQ96BU1 408 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 OSGIN1Q9UJX0 560 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 A6NIZ1 184 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 MAN2B1O00754 1011 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 ZNF35P13682 527 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms