RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 A6NL46 340 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 MCIDASD6RGH6 385 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 SLC30A4O14863 429 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 PLOD3O60568 738 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 LYPD3O95274 346 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 GPANK1O95872 356 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 PAHP00439 452 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 BMP8BP34820 402 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 RPL4P36578 427 aaKnown RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 PSMB10P40306 273 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 STAT5AP42229 794 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 EFNA3P52797 238 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 RAB38P57729 211 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 TEKQ02763 1124 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 SELENBP1Q13228 472 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 ARMC4Q5T2S8 1044 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 BMP8AQ7Z5Y6 402 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 TDHQ8IZJ6 230 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 FAM98AQ8NCA5 519 aaKnown RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 THAP3Q8WTV1 239 aaPredicted RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 RASD2Q96D21 266 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 DGAT2Q96PD7 388 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 NKX3-1Q99801 234 aaPredicted RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 ARHGAP9Q9BRR9 750 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 RTN4RQ9BZR6 473 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 C8orf33Q9H7E9 229 aaPredicted RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 SYNDIG1Q9H7V2 258 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 LYRM4Q9HD34 91 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 MED31Q9Y3C7 131 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 CMAHPQ9Y471 501 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 KIR2DS5A0A0G2JLQ3 304 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 A0A0G2JNG1 304 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 C2orf72A6NCS6 295 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 FABP12A6NFH5 140 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 ANKRD61A6NGH8 418 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 BLOC1S5-TXNDC5H3BN57 136 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 KIR2DS3K7RE56 304 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 BHLHE40O14503 412 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 SLC2A2P11168 524 aaPredicted RBP8.15□□□□□ -1.1
SNCA-201ENST00000336904 BCKDHBP21953 392 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 SHC1P29353 583 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 PRKCDQ05655 676 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 KIR2DS5Q14953 304 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 CD226Q15762 336 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 ODF4Q2M2E3 257 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 C3orf38Q5JPI3 329 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 IDNKQ5T6J7 187 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 PRPF38BQ5VTL8 546 aaKnown RBP8.15□□□□□ -1.1
SNCA-201ENST00000336904 OR5M10Q6IEU7 315 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 NIPAL3Q6P499 406 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 OR6K6Q8NGW6 343 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 OR5J2Q8NH18 312 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 OR51Q1Q8NH59 317 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 SLC25A46Q96AG3 418 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 C4orf36Q96KX1 117 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 ZNF649Q9BS31 505 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 FBRSQ9HAH7 460 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 DNAJB12Q9NXW2 375 aaKnown RBP8.15□□□□□ -1.1
SNCA-201ENST00000336904 SIGLEC7Q9Y286 467 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 HS3ST3A1Q9Y663 406 aa8.15□□□□□ -1.1
SNCA-201ENST00000336904 PRR23D1E9PI22 279 aaPredicted RBP8.15□□□□□ -1.11
SNCA-201ENST00000336904 CSTAP01040 98 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 DCNP07585 359 aaKnown RBP8.15□□□□□ -1.11
SNCA-201ENST00000336904 HOXC4P09017 264 aaPredicted RBP8.15□□□□□ -1.11
SNCA-201ENST00000336904 PRR23D2P0DMB1 279 aaPredicted RBP8.15□□□□□ -1.11
SNCA-201ENST00000336904 CT45A8P0DMV1 189 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 CT45A9P0DMV2 189 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 IL7P13232 177 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 HIST1H1CP16403 213 aaKnown RBP8.15□□□□□ -1.11
SNCA-201ENST00000336904 PYCR1P32322 319 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 CTBP2P56545 445 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 ERVK-25P63136 954 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 ZNF45Q02386 682 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 DSG2Q14126 1118 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 PLK5Q496M5 336 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 EIPR1Q53HC9 387 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 CT45A2Q5DJT8 189 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 ZNF322Q6U7Q0 402 aaPredicted RBP8.15□□□□□ -1.11
SNCA-201ENST00000336904 ESPNLQ6ZVH7 1005 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 SENP5Q96HI0 755 aaPredicted RBP8.15□□□□□ -1.11
SNCA-201ENST00000336904 DEPDC7Q96QD5 511 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 NMNAT3Q96T66 252 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 TIMP4Q99727 224 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 TMEM27Q9HBJ8 222 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 DUSP22Q9NRW4 184 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 IER3IP1Q9Y5U9 82 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 ASPMQ8IZT6 3477 aa8.15□□□□□ -1.11
SNCA-201ENST00000336904 C17orf105B2RV13 164 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 F13BP05160 661 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 RNH1P13489 461 aaKnown RBP8.14□□□□□ -1.11
SNCA-201ENST00000336904 CD38P28907 300 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 ACAA2P42765 397 aaKnown RBP8.14□□□□□ -1.11
SNCA-201ENST00000336904 ZP2Q05996 745 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 DMWDQ09019 674 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 ZNF181Q2M3W8 571 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 ZNF362Q5T0B9 420 aaPredicted RBP8.14□□□□□ -1.11
SNCA-201ENST00000336904 AGAP7PQ5VUJ5 663 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 APOOLQ6UXV4 268 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 TMEM91Q6ZNR0 172 aa8.14□□□□□ -1.11
SNCA-201ENST00000336904 PIAS4Q8N2W9 510 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms