RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ARSDP51689 593 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 TPGS2Q68CL5 300 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 TPRA1Q86W33 373 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 RDH10Q8IZV5 341 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 C20orf85Q9H1P6 137 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 VSTM2BA6NLU5 285 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 OR6C76A6NM76 312 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 COTL1Q14019 142 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 B3GLCTQ6Y288 498 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 NLRC3Q7RTR2 1065 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 NAA40Q86UY6 237 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 UEVLDQ8IX04 471 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 OR13F1Q8NGS4 319 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 OR4K15Q8NH41 348 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 MSI2Q96DH6 328 aaKnown RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 MCOLN1Q9GZU1 580 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF160Q9HCG1 818 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 H3BUI4 141 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 SCO1O75880 301 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 KITLGP21583 273 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 IRF4Q15306 451 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 EXOSC6Q5RKV6 272 aaKnown RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 PHYHD1Q5SRE7 291 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 OGFOD3Q6PK18 319 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 Q6ZPB1 254 aaPredicted RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 COMMD6Q7Z4G1 85 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 SIAH3Q8IW03 269 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 SEMA6DQ8NFY4 1073 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 OR6T1Q8NGN1 323 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 TM9SF4Q92544 642 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 TBC1D20Q96BZ9 403 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 SAT2Q96F10 170 aaPredicted RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 EGLN3Q9H6Z9 239 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 VSX1Q9NZR4 365 aaPredicted RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 TP53I11O14683 189 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 IVDP26440 423 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 LAP3P28838 519 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 EEF1A1P5Q5VTE0 462 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 C1orf87Q8N0U7 546 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 TMEM239Q8WW34 195 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 SGK3Q96BR1 496 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.21□□□□□ -0.93
COL4A6-201ENST00000334504 J3KTA2 159 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 GPR39O43194 453 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 APEX1P27695 318 aaKnown RBP9.21□□□□□ -0.93
COL4A6-201ENST00000334504 HOXA10P31260 410 aaPredicted RBP9.21□□□□□ -0.93
COL4A6-201ENST00000334504 AHRP35869 848 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 VEZF1Q14119 521 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 CLINT1Q14677 625 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF100Q8IYN0 542 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 IL22RA1Q8N6P7 574 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 CELF5Q8N6W0 485 aaKnown RBP9.21□□□□□ -0.93
COL4A6-201ENST00000334504 SPTSSAQ969W0 71 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 BTNL2Q9UIR0 455 aa9.21□□□□□ -0.93
COL4A6-201ENST00000334504 EXO1Q9UQ84 846 aaKnown RBP9.21□□□□□ -0.93
COL4A6-201ENST00000334504 TMEM265A0A087WTH1 108 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 YY2O15391 372 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 OR2C1O95371 312 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 KLK3P07288 261 aaPredicted RBP9.21□□□□□ -0.94
COL4A6-201ENST00000334504 MFGE8Q08431 387 aaPredicted RBP9.21□□□□□ -0.94
COL4A6-201ENST00000334504 BAK1Q16611 211 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 SLC22A6Q4U2R8 563 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 SERPINA11Q86U17 422 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM151BQ8IW70 566 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 OR2T11Q8NH01 316 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 GCDHQ92947 438 aaPredicted RBP9.21□□□□□ -0.94
COL4A6-201ENST00000334504 C1orf123Q9NWV4 160 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 LCATP04180 440 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 IRF2P14316 349 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 GABRA5P31644 462 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 THBS3P49746 956 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 ILKQ13418 452 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 TESK1Q15569 626 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM35AQ53FP2 167 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 COX15Q7KZN9 410 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 GKN2Q86XP6 184 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 OR5D14Q8NGL3 314 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 BRI3BPQ8WY22 251 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 DPF1Q92782 380 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 NFAT5O94916 1531 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 FAM183AA6NL82 134 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 F5H5K5 113 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 CCL5P13501 91 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 FUT1P19526 365 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 SIM1P81133 766 aaPredicted RBP9.21□□□□□ -0.94
COL4A6-201ENST00000334504 GBX1Q14549 363 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 VAMP3Q15836 100 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 C17orf107Q6ZR85 190 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF689Q96CS4 500 aaPredicted RBP9.21□□□□□ -0.94
COL4A6-201ENST00000334504 FBXL4Q9UKA2 621 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 KIAA1210Q9ULL0 1709 aa9.21□□□□□ -0.94
COL4A6-201ENST00000334504 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 CDHR4A6H8M9 788 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 METTL15A6NJ78 407 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 FTCDNL1E5RQL4 147 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 TO15178 435 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 ALPLP05186 524 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 NPBWR1P48145 328 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 INCA1Q0VD86 236 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 PODNL1Q6PEZ8 512 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms